Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00892 ATGGCTGAGAGTGCAGTGCGTTTTCTTCTCCAAAGGCTTGCACCTGTTTTTGAGAATAAGGTGAAATTGTTCACTGGAGTTCAAGCAGAAGTGATATACCTGAAAGGACAGTTGGAGCTGATAAGAGCCTTCTTAAGGGGTGCAGATGCATTAGAAGAGAGTGATGAGGAACTTAAAGTTTGGGTTAAGCAAGTCAGAGACGTTGTTCATGAGGCTGAAGATCTTCTTGATGAATTGGAACTTGTCCAGGTACATAACCATACAAATGGATTCTCTATTTATCTCCGTATCAGGAATATGAAAGCTCGCTATCGGATTGCACATGAGTTAAAAAGCATCAACTCACGCATGAAAACTATTTCTTCAAATCGTAAGAGATTCCTCGGAAAACTGGACACTTCTTCAGTGGCTTCAAATTCCATTAATACAGGTGACGCATGGCATGATCAACGAGGAGATGCCCTTCTCCTGGACAACACTGATCTAGTGGGCATAGACAGGCCAAAAAAGCAGTTTATAGGATGGTTGATCAACAGTTTTCCTGGACGAAAAGTGATTTCTGTCGCTGGAATGGGAGGGATAGGAAAAACTACATTGGTGAAGAAAGTATATGATGATCCAGATGTAAGAAAACACTTCAAAGCCTGTGTTTGGGTGACTGTTTCTCAATCTTGTAAAATTGAGGAACTTCTCAAAGACTTGGCCCTGAAGCTCTTCTCTGAAATAAGGCGACCAATTCCAGAGGGAATGGAAAGCATGTGTAGTGATAAGCTCAAGATGATTATCAAAGACCTGCTGCAGAGGAAGAGGTATCTAGTGGTATTTGATGATGTGTGGCATATGTATGAATGGGAAGCAGTCAAATATGCATTGCCAAACAATAATTGTTGTAGCAGGATCATGATCACCACTCGCAGATCTGATTTAGCCATTACCTCCAGCATAGAATCCAACGGTAAGGTGTATAACTTGCAACCCTTGAAAGAAGATGAAGCTTGGGATCTATTTTGTAGGAACACCTTTCAGGGTGATTCATGTCCCTCATGTTTGATTGACATCTGTAAATATATCTTAAGAAAATGTGAGGGTCTTCCCCTTGCAATTGTGGCAATCAGTGGTGTCCTGGCTACAAAAGACAAGCGCAGGATTGATGAGTGGGATATGATTTGCCGTAGTCTTGGAGCTGAAATTCAAGGCAATGGCAAACTTGACAGTTTTAAAACTGTACTCAACCTCAGTTTTAATGATTTACCTTACCATTTGAAATACTGTTTCTTGTACTTAAGCATCTTCCCTCAGGACTATCTGATTCAGCGCATGAGATTGATTCGCTTATGGATAGCAGAAGGATTTATCGAAGCCAAAGAAGGAAAAACAAAGGAAGATGTTGCAGATGATTACCTGAAGGCGCTCCTGAACAGAAACTTAATACAAGTAGCAGAAACAACATCTGATGGAAGGGTCAAAACTTTGAGAATCCATGATCTTTTACGAGAGATCATAATTTTGAAGTCCAAGGACCAAAACTTTGCATCCATTGTCAAAGAACAAAGTATGGCATGGCCTGAAAAGATTAGGCGGCTTTCAGTGCAAGGAACATTACCATATCGGCAGCAACATAGGTCTGTCTCTCAACTCCGTTCTTTTTTAATGTTTGGGGTTGGAGAATATGTATCCCTTGGGAAACTGTTCCCGAGTGGTTTTAAATTGCTTAGTGTTTTAGATTATCAAGATGCACCTTTGAAGAAGTTTCCACTGGCAGTTATTGATCTATACCATTTAAGATATCTAAACTTAAGGAACACAAAAGTGAAAATGGTTCCAGGTTACATTATAGGGAAGTTGCATAATCTAGAAACACTCGATCTTAAGAAGACTTCTGTCAGAGAACTGCCTGTAGATATTCTCAAGCTTCAAAAGCTTCGCCATCTCCTTGTCTATCAGTGTAAATTCAAAGGTTATGCACAGTTTCACTCTAAACATGGTCTTAAGGCCCCCACTGGAATAGGAAATTTGAAGTCACTACAAAAGCTTTGTTTTGTGGAGGCAAACCTAGACCATGGAATGATAATAAGGCAGTTAGGGGAGCTAAGTCAACTAAGAAGGTTAGGAATCTTGAAACTTAGAGAGGAGGATGGAATGGCTTTCTGTTTGTCCATTGAGAAATTAACTAATCTTCATGCCCTCTCTGTTACTTCTGAGGGTGAGGGTAAAGTCATTGATCTGACATTTCTTTGTTCACCTCCTCCATTTCTTCAACGCTTGTATTTGTCAGGGCGTCTACAAGAGTTACCAAGTTGGATACAGTCTCTTCATAGCCTAGCCAGGTTATTTCTGAAATGGAGCTGCTTAAAATATGATCCTCTAGTGTATCTGCAAGATCTGCCAAACCTTGCACATCTTGAACTACTTCAAGTTTATGATGGTGACACTTTGCATTTTAGTTGTGGAAAGTTCAAGAAGCTCAAGGTTTTAGGTCTTGACAAATTTGATGGACTCAAACAGGTGACAGTGGGAAAGGATGCAATGACTTGCTTAGAAAAGCTGAGCATAGGACGTTGTGAATTGTTGAAGAAGGTTCCATCAGGCATTGAGAATTTGACTAAGCTGAAAGTCCTTGAGTTTTTCGATATGCCAGATGAACTGATGAAGACAATATGTCCACATGGTCCAGGAAAAGATTACTGTAAAGTTTTACATATACCAGATATCTATTCCACCTACTGGAGAGATGGAGGTTGGGATGTCTATGCTCTAGACAGTTTCAGCAAAGATTGTTCTCCTAGATCAGGCACTGTCATAAGAAGTCATGAACCTCGCATTCAGTGGAAGGTGTAG 2838 0.4035 MAESAVRFLLQRLAPVFENKVKLFTGVQAEVIYLKGQLELIRAFLRGADALEESDEELKVWVKQVRDVVHEAEDLLDELELVQVHNHTNGFSIYLRIRNMKARYRIAHELKSINSRMKTISSNRKRFLGKLDTSSVASNSINTGDAWHDQRGDALLLDNTDLVGIDRPKKQFIGWLINSFPGRKVISVAGMGGIGKTTLVKKVYDDPDVRKHFKACVWVTVSQSCKIEELLKDLALKLFSEIRRPIPEGMESMCSDKLKMIIKDLLQRKRYLVVFDDVWHMYEWEAVKYALPNNNCCSRIMITTRRSDLAITSSIESNGKVYNLQPLKEDEAWDLFCRNTFQGDSCPSCLIDICKYILRKCEGLPLAIVAISGVLATKDKRRIDEWDMICRSLGAEIQGNGKLDSFKTVLNLSFNDLPYHLKYCFLYLSIFPQDYLIQRMRLIRLWIAEGFIEAKEGKTKEDVADDYLKALLNRNLIQVAETTSDGRVKTLRIHDLLREIIILKSKDQNFASIVKEQSMAWPEKIRRLSVQGTLPYRQQHRSVSQLRSFLMFGVGEYVSLGKLFPSGFKLLSVLDYQDAPLKKFPLAVIDLYHLRYLNLRNTKVKMVPGYIIGKLHNLETLDLKKTSVRELPVDILKLQKLRHLLVYQCKFKGYAQFHSKHGLKAPTGIGNLKSLQKLCFVEANLDHGMIIRQLGELSQLRRLGILKLREEDGMAFCLSIEKLTNLHALSVTSEGEGKVIDLTFLCSPPPFLQRLYLSGRLQELPSWIQSLHSLARLFLKWSCLKYDPLVYLQDLPNLAHLELLQVYDGDTLHFSCGKFKKLKVLGLDKFDGLKQVTVGKDAMTCLEKLSIGRCELLKKVPSGIENLTKLKVLEFFDMPDELMKTICPHGPGKDYCKVLHIPDIYSTYWRDGGWDVYALDSFSKDCSPRSGTVIRSHEPRIQWKV* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00892 945 Gene3D - 159 317 IPR027417 -
Lapu2g00892 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 428 IPR027417 -
Lapu2g00892 945 Gene3D - 326 413 IPR042197 -
Lapu2g00892 945 SUPERFAMILY L domain-like 493 880 - -
Lapu2g00892 945 FunFam Probable disease resistance protein At1g61300 154 318 - -
Lapu2g00892 945 Pfam NB-ARC domain 168 415 IPR002182 GO:0043531
Lapu2g00892 945 PANTHER DISEASE RESISTANCE PROTEIN RP 42 855 IPR044974 GO:0006952
Lapu2g00892 945 CDD RX-CC_like 2 122 IPR038005 -
Lapu2g00892 945 Gene3D - 414 504 IPR036388 -
Lapu2g00892 945 FunFam Probable disease resistance protein At1g63360 414 503 - -
Lapu2g00892 945 Gene3D - 4 121 - -
Lapu2g00892 945 Pfam Rx N-terminal domain 5 87 IPR041118 -
Lapu2g00892 945 Gene3D Ribonuclease Inhibitor 538 889 IPR032675 -
Lapu2g00892 945 PRINTS Disease resistance protein signature 185 200 - -
Lapu2g00892 945 PRINTS Disease resistance protein signature 361 375 - -
Lapu2g00892 945 PRINTS Disease resistance protein signature 613 629 - -
Lapu2g00892 945 PRINTS Disease resistance protein signature 265 279 - -
Lapu2g00892 945 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00892 Lapu-Chr2 8254184 8257969 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00892 173 808 WRKY Transcription Factor Family AT5G45050 23.617 5.94e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00892 K13457 - gmx:100805346 1685.62