Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00876 ATGGGTTACGAAGACGATCCGTACCGCGACGAGGACGGTGAGCCCTTGATGGACTACGACGACGTTCAATCCGACCGCGAGCCCTCTCCGGAGCCTCGCCACCAGCTCGACGATTACGAGGACGAAGTCAACGACGAGTGGCGCGGCCGGGATCGGTCGCAGACGCCGGTGTACGACAACGATGCGGCGCGCTCGAAGCCGCGGAAGAGGCTGATCAAGAAGAGCGACGCTGGGAAGCAGTCGGTGGCACCGGAGCTCGAGGATGAAGAGGAGGAGGGGTATGTTCCCGAGGCGAGGTTTGACGAGGGGGATGGAAGGAAGAGGAAGAAGGGAAAGGAAGTTGGGAGTGGGAAGAAGGAGAAGAGGCTGAAAGGGGAGAAGAGGTTTGGCAGTGGCAGTGGCTCCAAATTTGGGGGTTCCAAAGAAGGTTTTGGTGGTAAGGCTGGGAAGGATCATGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCTGGGGGAGATTCTGAGGATGATCACGAGGGTGTCAGGAATCTGGACGATGACAACTTTATAGATGACACGGGAGTGGAACCTGCTTATTATGGTAGTGATGAACCACGTTCTCCTGGTGATGCTCCTCAGGCGGAGGAAGGTGAAGAGGATGAAGAAATCAAGGATCTTTTCAAGATAGGGAAGAAAAGGAAGAAGAACGAGAGAAGTCCTGCTGAAATAGCTTTATTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAGGAGGATGCTGATCTTAATAGACAGGGGAAACCAGCCATTAATAAACTCAAGAAGTTGCCTCTCCTTACAGAGGTCCTCTCAAAGAAACAGCTTCAACTAGAGTTTTTAGATCATGGAGTGCTAACTTTATTGAAAAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCTAACATAAATATACGCACGGAAATTTTGAAGATTTTGAATGATTTTCCTATTGACCTTGAGCAGTATGATAGAAGAGAACAACTGAAGAAGAGTGGCCTTGGAAAGGTAATTATGTTTTTATCAAAATCCGATGAAGAAATCAGTGTAAACAGGAAACTAGCCAAGGAACTTGTTGACAAGTGGAGCCGACCTATATTTAATAAGAGTACGAGGTTTGAAGACATGAGAAATGTAGAGGATGACAGGGTTCCTTTTAGGAGACCGTCGGTTAAAAAGCCAACAAATAAAGCTGCAGGAATATCGAGAGACAGTGATCTTGATTTGGAAATTTCACAGCCCAGGGCTGGACAATCCTCTTCTAGGCAGCACGCTTCGAGGCCTGAAGCAACACCTTTGGATTTTGTGATACGTCCCCAATCTAAAATTGACCCAGAAGAAGTTAGAGCACGGGCAAAGCAAGCTGCTCAAGATCAGCAGCGTATGAAGATGAATAAGAAATTGCAGCAGTTGAGGGCTCCAAAAAAGAGGCAACTTCAGGCTACAAAACTGAGTGTGGAAGGTCGTGGTATGGTCAAATATTTGTAA 1515 0.4759 MGYEDDPYRDEDGEPLMDYDDVQSDREPSPEPRHQLDDYEDEVNDEWRGRDRSQTPVYDNDAARSKPRKRLIKKSDAGKQSVAPELEDEEEEGYVPEARFDEGDGRKRKKGKEVGSGKKEKRLKGEKRFGSGSGSKFGGSKEGFGGKAGKDHDGEVKEMWDTIAGGDSEDDHEGVRNLDDDNFIDDTGVEPAYYGSDEPRSPGDAPQAEEGEEDEEIKDLFKIGKKRKKNERSPAEIALLVENVMAELEVTAEEDADLNRQGKPAINKLKKLPLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRTEILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEISVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEDDRVPFRRPSVKKPTNKAAGISRDSDLDLEISQPRAGQSSSRQHASRPEATPLDFVIRPQSKIDPEEVRARAKQAAQDQQRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMVKYL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00876 504 MobiDBLite consensus disorder prediction 145 183 - -
Lapu2g00876 504 MobiDBLite consensus disorder prediction 421 436 - -
Lapu2g00876 504 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 290 378 IPR035441 -
Lapu2g00876 504 ProSiteProfiles TFIIS N-terminal domain profile. 295 378 IPR017923 -
Lapu2g00876 504 MobiDBLite consensus disorder prediction 19 66 - -
Lapu2g00876 504 MobiDBLite consensus disorder prediction 98 129 - -
Lapu2g00876 504 Pfam TFIIS helical bundle-like domain 320 375 IPR017923 -
Lapu2g00876 504 MobiDBLite consensus disorder prediction 1 216 - -
Lapu2g00876 504 MobiDBLite consensus disorder prediction 449 465 - -
Lapu2g00876 504 MobiDBLite consensus disorder prediction 394 485 - -
Lapu2g00876 504 MobiDBLite consensus disorder prediction 1 18 - -
Lapu2g00876 504 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 234 381 IPR035441 -
Lapu2g00876 504 PANTHER PROTEIN IWS1 HOMOLOG 1 1 504 IPR044204 GO:0009742|GO:0032784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lapu2g00876 Med26 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00876 K17498 - gmx:100801805 844.728