Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00870 ATGGGCAGCAGTGAGATGGATAAAGCTCCAAAAGAGAAGGAGTCAAAAACGCCACCACCTACGTCACAGGAGCAGTCTTCAACCACCGCTACAGGAACAATTAATCCTGATTGGCCTGGATTTCAGGCATATTCTCCTATACCTCCACACGGTTTCTTGGCATCAAGTCCCCAGGCTCACCCTTATATGTGGGGTGTCCAGCAATTTATGCCTCCCTATGGTACTCCACCACATCCATATGTTGCAATGTATCCCCCTGGTGGCATTTATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGCCCTTTTGCTATGCCTTCTCCAAATGGAATTGCCGAGGCTTCAGGAAACACTCCTGGCAGCATGGAAGCCGATGGTAAGCCTCCTGAAGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATCACAGGGAAAAGTAATGAACATGGAAAAACAACAGGGGCATCTGCTAATGGAATTCATTCAAAGAGTGGTGATAGTGCAAGTGAAGGGGAAGGTACCAGTGAAGGAAGTGATGCAAATTCTCAAAATGACTCTCAATTGAAATCAGGGGGCAGGCAGGATTCTTTTGAAGATGAACCATCTCAAAATGGCAGTTCAGCATATACTCCTCAAAATGGGGGCCTAAATGCACCTCATACAGTGGTCAATCAAACTATGCCTATCATACCTATCTCTGCAGGTGGTGCTCCTGGAGCTGTTCCTGGCCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTACACCGGCTCCGTCCAACATTCCTGCACTTGCAAGAAAGGTTCCATCTACTGGAGTTGCTGGATCACGGGATAGTGTTCAGTCACAACTCTGGCTACAGGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGTAAGCAGGCCGAGTGTGACGAGTTAGCTCAGCGTGCTGAGGCCTTGAAGGAAGAAAATGCTTCTCTCCGGTCAGAAGTAAGTCGAATCAGGAGTGATTATGAACAGCTACTATCCGAGAACACTGCTCTCAAGGAAAGACTTGGGGAACTACCTGCGAATGATGATCATAGGTCTGGCAGGAATGATCAACATGTGGGTAATGACGCTCAACAGAATGGGCAGACAGAGGCTGTGCAGGGTGGTCACTAG 1218 0.4729 MGSSEMDKAPKEKESKTPPPTSQEQSSTTATGTINPDWPGFQAYSPIPPHGFLASSPQAHPYMWGVQQFMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKSNEHGKTTGASANGIHSKSGDSASEGEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGSSAYTPQNGGLNAPHTVVNQTMPIIPISAGGAPGAVPGPTTNLNIGMDYWGTPAPSNIPALARKVPSTGVAGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSDYEQLLSENTALKERLGELPANDDHRSGRNDQHVGNDAQQNGQTEAVQGGH* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00870 405 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Lapu2g00870 405 CDD bZIP_plant_GBF1 306 356 IPR045314 GO:0003700|GO:0006355
Lapu2g00870 405 MobiDBLite consensus disorder prediction 299 327 - -
Lapu2g00870 405 MobiDBLite consensus disorder prediction 387 405 - -
Lapu2g00870 405 Pfam bZIP transcription factor 301 363 IPR004827 GO:0003700|GO:0006355
Lapu2g00870 405 MobiDBLite consensus disorder prediction 146 230 - -
Lapu2g00870 405 Pfam Disordered region downstream of MFMR 135 274 - -
Lapu2g00870 405 SUPERFAMILY Leucine zipper domain 304 360 IPR046347 GO:0003700|GO:0006355
Lapu2g00870 405 MobiDBLite consensus disorder prediction 19 38 - -
Lapu2g00870 405 SMART brlzneu 301 365 IPR004827 GO:0003700|GO:0006355
Lapu2g00870 405 Coils Coil 321 369 - -
Lapu2g00870 405 MobiDBLite consensus disorder prediction 371 386 - -
Lapu2g00870 405 MobiDBLite consensus disorder prediction 1 45 - -
Lapu2g00870 405 MobiDBLite consensus disorder prediction 112 230 - -
Lapu2g00870 405 MobiDBLite consensus disorder prediction 1 18 - -
Lapu2g00870 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 303 366 IPR004827 GO:0003700|GO:0006355
Lapu2g00870 405 MobiDBLite consensus disorder prediction 365 405 - -
Lapu2g00870 405 Gene3D - 304 358 - -
Lapu2g00870 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 308 323 IPR004827 GO:0003700|GO:0006355
Lapu2g00870 405 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 394 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00870 Lapu-Chr2 8010175 8022204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00870 1 374 bZIP Transcription Factor Family AT2G35530 65.195 3.96e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu2g00870 MFMR_assoc 2.5e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00870 K09060 - gmx:778122 743.421