Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00869 ATGGCACCACCTCCAACGGACTCAGAACCAGAATCCGAAGCGCTGCGCCTCAAGGCCATGGCGGAGTCCAAGTTCAAAGCCTCCAACAACGCCAAATCCGCTCTTAAATACGCGAAGCGCGCGGAGCGTCTCTGCCCGCACCTCCCAGGCGTGTCAGAGGCCGTCACCTCGCTCACCGTCCTCGCCGCGCCGGACTGGTACAGCGCCCTTGGCGCGGAGCCCTTCGCAAACAGCAGCATCATTCGGACACAGTACAAGAAGCTCGCGCTGCTCCTCCACCCCGACAAGAACCCTAACGTGGCGTCCGAGGAGGCCTTCAAGCTCATCGGCGAGGCCTTCCACATTCTCTCCGACCGGAGTCGCCGCCGAGAGTACGACGCCGAGCTCCAGCGGAGGATTAAGGCGGAGAGCGAGACGTTCTGGACCGCCTGCTCCACTTGCAGGCTCCTTCACCAGTTCCAGAGAAAGTATATGGGTCATGAATTGGTGTGTCCGAGTTGTGAGAAGAGTTTTAGGGCAGTGGAAACGGTTCAAAGTGATGGGGATGGTGATGGGGAAGGTAGGGTTAGGAGTAGGAGGTTGAAGTTGAAAGAGATAAATCAAAAGAAGGAGAAAATGGGTGTGAAAGGGAAAGTGGATGATGAAGTGGGGAATGAAAAGGAAGTGAAATTGAGGAAGAGAATGCGTTCAGTTGGGGAGGTGTTGGAGAGGTCCAAACCTAGTAAGAGGGTTAAAAATGGGGAGGAAATGATGACATTGGCTGAATTTCAGAATGAGGTAAGGAGAAAGTTGCAGGAAAAAAGGTTGAAGGAAAAAGAAAAGGAAAAGGAGAAGGATAGAATTGAGAAGAGGAGCAACCGGGTGGCAAGGCGTCGGGGATTGAGAAACTTTGAAGGTTTAGAGGGTGGAGAGGTGAGGCCTTTGAAGAAGAGTGTGAGGCTTGTTATTGAGGAGAAGCGTGTGGGTTTATCCAAGAGGAAGGGGTTGAGATTTGTAGAGCATAGGGATTCTGATAGAGGGGACTTGGAAAATATGGCAGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGGAGCTTTAAGAAGGGTCAAGTGTGGGCAGTGTATGATGATGATGATGGAATGCCAAGGAATTATGCCTTGATTGATGGAACTCTTTCGGTGAATCCTTTTGAAGTGAGCTTAAGTTGGTTGGATGTACAGATCAGTGGGGATGGGAGGATAGTTAACAGGGAGAAAATGGGGTTTCATATACCTTGTGGGAGATTTAAGGTTGCCAGGAAGACTTCTGTGAATTCGGTAAATATATTTTCCCATGTTGTGGATTGTGACCGGGCAGCACGTGAGCTTTACAAAATATACCCCAAGAAAGGCTCAGTGTGGGCGCTTCATGGCGAGGGAAGTATTGATGCAGAGGAGGGCAAGCGATGCTATGACATTGTTGTATGTCTGACAAGTTACAATGAGGTGAATGGTCTGAGCATGGCGTATCTTCAGAAGGTTGATGGTTACAAGACCGTATTCAGGCGGCAAGAGAAGGGGAGTTGTGCTATTAGATTTCTTGGGAAGGATGACATGTGGTTAGTTTCTCATCAGATTCCTGCACGGAGGCTTATTGGTGATCAAACTCCTGAACTGTTGAAAGACTGTTGGGAACTTGATCCCGCTTCACTTCCTTCAGATTTACTTACTAGTGGTGGCATTGATAATTAA 1725 0.491 MAPPPTDSEPESEALRLKAMAESKFKASNNAKSALKYAKRAERLCPHLPGVSEAVTSLTVLAAPDWYSALGAEPFANSSIIRTQYKKLALLLHPDKNPNVASEEAFKLIGEAFHILSDRSRRREYDAELQRRIKAESETFWTACSTCRLLHQFQRKYMGHELVCPSCEKSFRAVETVQSDGDGDGEGRVRSRRLKLKEINQKKEKMGVKGKVDDEVGNEKEVKLRKRMRSVGEVLERSKPSKRVKNGEEMMTLAEFQNEVRRKLQEKRLKEKEKEKEKDRIEKRSNRVARRRGLRNFEGLEGGEVRPLKKSVRLVIEEKRVGLSKRKGLRFVEHRDSDRGDLENMAVVDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDGTLSVNPFEVSLSWLDVQISGDGRIVNREKMGFHIPCGRFKVARKTSVNSVNIFSHVVDCDRAARELYKIYPKKGSVWALHGEGSIDAEEGKRCYDIVVCLTSYNEVNGLSMAYLQKVDGYKTVFRRQEKGSCAIRFLGKDDMWLVSHQIPARRLIGDQTPELLKDCWELDPASLPSDLLTSGGIDN* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00869 574 Pfam DnaJ domain 65 126 IPR001623 -
Lapu2g00869 574 CDD DnaJ 65 118 IPR001623 -
Lapu2g00869 574 PRINTS DnaJ domain signature 85 100 IPR001623 -
Lapu2g00869 574 PRINTS DnaJ domain signature 101 121 IPR001623 -
Lapu2g00869 574 PRINTS DnaJ domain signature 67 85 IPR001623 -
Lapu2g00869 574 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Lapu2g00869 574 PANTHER BNAC03G44070D PROTEIN 11 563 - -
Lapu2g00869 574 Coils Coil 253 291 - -
Lapu2g00869 574 Gene3D DnaJ domain 55 147 IPR036869 -
Lapu2g00869 574 SUPERFAMILY Chaperone J-domain 58 129 IPR036869 -
Lapu2g00869 574 SMART dnaj_3 64 121 IPR001623 -
Lapu2g00869 574 MobiDBLite consensus disorder prediction 267 287 - -
Lapu2g00869 574 Pfam Domain of unknown function (DUF3444) 344 545 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00869 Lapu-Chr2 8006003 8008224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00869 7 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.049 1.71e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00869 - - ccaj:109800659 856.284