Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00859 ATGGAACTTTTCCCAGCACAACCCGACTTGTCCTTACAAATCAGCCCTCCAAACACCAAACCAGCATCAAGTTGGAGGAGAAGCACGGAAGAAGATATGGATTTGGGGTTTTGGAAGCGAGCCTTGGACTCGAGAAACTCCATATCATCAATGGCCAAACAAGACTCTTGCGTGGGCCTCTCCCTCTCCAATCCAAAAGCCTCGGATAACTCCAACTCCTCTAACCTCATTCACCACTTCCAAAACGGTGCCAATAATGCCACCAACAACCCCTTCCAACCCTTTCAGCAGAACCATTACTTCCATCAGCCACTGTTCCAGCCTCAGCACCAAAGCTTAAGTCAAGACCTCGGCTTTCTCAGACCCATTAGAGGAATCCCAGTGTATCAAAACCCTCCTCCTATACCATTCACTCAACGCCACCACCATCATCACCTACCTCTGGAGACTTCCACCACCACCCCTTCTTCTATTATTTCCAGCACAAACACTGGTTCTACCCCTTTCCATTCTCAGGCCCTTATGAGATCAAGGTTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGGGCTCCGAGGATGCGTTGGACTTCTACCCTCCATGCTCGCTTTGTTCATGCCGTTGAACTCTTGGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTCAAGTCTCATCTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCCGCCGCTTCATCAGGGCAATCCGACGTGTATGATAATGGGTCGTCTGGAGATACTTCTGATGACTTAATGTTTGATATAAAATCTTCTCGAAGGTCTGATGTATCCATTAAGCAGGGAAGATCAAGTGTTAATCAAGATAAGGAATATCACGGTCTCTGGGGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGACAAAGACTGATTCTGTTGGAAACGTGCCTTCTCTTGAGAAGGAAATGGATCCGAAGTGTCTAAGCTATGAGAGAATATCAGATGGAAGCTCATCCTCAAATGTTTCAGGATCAAGCCCGAAGAAGCCTAGTTTGGATTTGGAATTCAGCTTGGGGCAGCCACTTTAA 1119 0.4736 MELFPAQPDLSLQISPPNTKPASSWRRSTEEDMDLGFWKRALDSRNSISSMAKQDSCVGLSLSNPKASDNSNSSNLIHHFQNGANNATNNPFQPFQQNHYFHQPLFQPQHQSLSQDLGFLRPIRGIPVYQNPPPIPFTQRHHHHHLPLETSTTTPSSIISSTNTGSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSRRSDVSIKQGRSSVNQDKEYHGLWGNSSREAWLHGKTKTDSVGNVPSLEKEMDPKCLSYERISDGSSSSNVSGSSPKKPSLDLEFSLGQPL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00859 372 FunFam Myb family transcription factor 190 248 - -
Lapu2g00859 372 MobiDBLite consensus disorder prediction 141 168 - -
Lapu2g00859 372 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 371 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lapu2g00859 372 NCBIfam myb-like DNA-binding domain, SHAQKYF class 192 245 IPR006447 GO:0003677
Lapu2g00859 372 Gene3D - 191 248 - -
Lapu2g00859 372 MobiDBLite consensus disorder prediction 342 360 - -
Lapu2g00859 372 MobiDBLite consensus disorder prediction 341 372 - -
Lapu2g00859 372 MobiDBLite consensus disorder prediction 250 275 - -
Lapu2g00859 372 SUPERFAMILY Homeodomain-like 189 245 IPR009057 -
Lapu2g00859 372 MobiDBLite consensus disorder prediction 1 29 - -
Lapu2g00859 372 MobiDBLite consensus disorder prediction 149 168 - -
Lapu2g00859 372 MobiDBLite consensus disorder prediction 250 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00859 Lapu-Chr2 7858618 7864238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00859 1 371 G2-like Transcription Factor Family AT4G17695 38.205 1.20e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu2g00859 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00859 - - gmx:100798081 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00859 2 7858618 7864238 Lapu2g00859 2 7858618 7864238 ECH