Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00848 ATGACATTGGTTATCAGAGAGAGGAGACACAAGCAAGCTCTAAGGCTTTCATTACCAAAAGCTCCTTTGGTTTCATCACATTCAGATTCCCCACACCAAATTCACGTAGCAGCAGTGCTCACAACATCCCCATATTCCCATGTAGACTCTTCTCCAGGCATCATCATCAAGGACCTTTCGGACCTTCAGAAGCTAGCAGTTCTTGGCCATGGAAATGGTGGCACAGTATACAAAGTTTATCACAATAATACCCGCTCTTTCTATGCCTTGAAAGTGCTACGCTTGAACGAGAATGGTCTTGGCATTCGGCAACCCGCTACACTCGAAGCTGAGATTCTAAAACGAGTGGATTCACCATATATAGTAAGGTGTCATGCAGTTTTTGACAATGGTAATTGCAATAATGATGGTGACAACGGAGGTGATATTAGCTTTGTTATGGAATACATGGAAGGAGGGTCGTTGCATGATGTGTTGAGAGATCATCGTAGATTGCCTGAAGAGGTTATCTCGGTGTTGGCTAGGCGTGTTTTGGAAGGACTTAACTATTTGCACGGCATGAAGATTGTTCATAGAGATATTAAACCATCAAACTTACTTGTGAACGATAAAGGGGAGGTAAAGATTGCAGATTTTGGAGTGAGTCATGTGGTGGAAGGTAGGTTTGAAGGAAATGAATATGATGCAGGCACTTGTGCTTACATGAGTCCGGAAAGGATTGATCCAGAAAGATGGGGTGGTGAAAATGCAGATGAGTTTGCAGGAGATGTGTGGTCAATGGGAGTAGTAATGTTGGAATGCCTTTTGGGTTATTTTCCATTGATTGGTCCAGGGCAGAGACCAGATTGGGCAACTTTGATGTGTGCAATTTGCTTTGGTGAGAATCTGGAGATGCCAGAAAAAGCATCACCAGAGTTTCAAAATTTTGTGAGGAGGTGTCTTGAGAAGAATTGGAGGAAGAGAGCATCAGTATTAGAACTTCTTCACCACCCTTTTGTCACACAAAAAATCTGTTGCTCTTCTGGAAAAGAGCTTGGCGATTATGTTCTTGGGGGACTGCAT 1062 0.4303 MTLVIRERRHKQALRLSLPKAPLVSSHSDSPHQIHVAAVLTTSPYSHVDSSPGIIIKDLSDLQKLAVLGHGNGGTVYKVYHNNTRSFYALKVLRLNENGLGIRQPATLEAEILKRVDSPYIVRCHAVFDNGNCNNDGDNGGDISFVMEYMEGGSLHDVLRDHRRLPEEVISVLARRVLEGLNYLHGMKIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFEGNEYDAGTCAYMSPERIDPERWGGENADEFAGDVWSMGVVMLECLLGYFPLIGPGQRPDWATLMCAICFGENLEMPEKASPEFQNFVRRCLEKNWRKRASVLELLHHPFVTQKICCSSGKELGDYVLGGLH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00848 354 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 32 336 - -
Lapu2g00848 354 Gene3D Transferase(Phosphotransferase) domain 1 148 344 - -
Lapu2g00848 354 FunFam Mitogen-activated protein kinase kinase 1 41 151 - -
Lapu2g00848 354 SMART serkin_6 62 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00848 354 Pfam Protein kinase domain 63 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00848 354 CDD PKc_MAPKK_plant_like 60 335 - -
Lapu2g00848 354 SUPERFAMILY Protein kinase-like (PK-like) 43 337 IPR011009 -
Lapu2g00848 354 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Lapu2g00848 354 FunFam Mitogen-activated protein kinase 2 152 344 - -
Lapu2g00848 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Lapu2g00848 354 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Lapu2g00848 354 ProSiteProfiles Protein kinase domain profile. 62 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00848 Lapu-Chr2 7739753 7741031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00848 1 336 MAP Kinase Kinase Gene Family AT1G32320 52.083 9.56e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lapu2g00848 Pkinase 6.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00848 K20604 - gmx:100817973 567