Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00837 ATGGCTCCTTCCTTCGACACAACCAATCACACAGTTTGCGTCATGGACGCCTCCGGCCACTTGGGCTTCACCCTCGTCCAGAGACTCCTCCAAAGGGGCTACACCGTCCATGCCTCCGTTCAAAAATATGGTGAAGAAGACCTATTCACTGGAATTTCCGCCGACTCTAATAAGCTCAAGCTTTTTCGATCCGATCCATTTGATTACCATAGCATAATCGACGCACTCCGAGGCTGCTCTGGTTTGTTCTACACCTTCCAACCTCCCCATGACCAGCCAAATTATGACGAATACATGGCAGACGTGGAAGTAAGAGCTGCACACAACGTGCTGGAAGCCTGTGCCCAGACAGAGACAATAGATAAAGTGGTTTTCACTTCCTCAGCAACCGCAGTAGTTTGGAGGGAGGATCGCAAGACCATGGAACTAGATCTAGATGAGAGACATTGGAGTGATGTCAATTTCTGCCGCAAATTCAAGTTATGGCATGGCGTGTCGAAGACAATGGCTGAGAAGAGTGCGTGGGCCTTAGCAATGGACAGAGGAGTGAATATGGTGTCCATCAATGCAGGTTTGCTGATGACTCATGATCTCTCCATCCAACACCCTTACCTCAGAGGAGCTGCTGAGATGTACGAGGATGGTGTTTTTGTGACTGTTGATTTACCTTTCTTGGTGGATGCCCACATCTGCGTCTATGAGGAAGCCTCATCCTACGGTCGTTATTTGTGCTTTAATCACATCATCAACACCCACGAAGACGCCGTTCAGTTAGCTCAGAAGTTGACTTCTGCTGCTTCGTCTTCTTCCACATCCTCTTCCCAGCAAAGTGGCGACCTGGGTAAGGGTTTCATCGAACAGAAAATTAGCAACAAGAAGTTGAACAAATTGATGGTGAACTTCGAAGCTTGA 912 0.4814 MAPSFDTTNHTVCVMDASGHLGFTLVQRLLQRGYTVHASVQKYGEEDLFTGISADSNKLKLFRSDPFDYHSIIDALRGCSGLFYTFQPPHDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAGLLMTHDLSIQHPYLRGAAEMYEDGVFVTVDLPFLVDAHICVYEEASSYGRYLCFNHIINTHEDAVQLAQKLTSAASSSSTSSSQQSGDLGKGFIEQKISNKKLNKLMVNFEA* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00837 303 CDD FR_SDR_e 12 299 - -
Lapu2g00837 303 Gene3D - 4 303 - -
Lapu2g00837 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 263 IPR036291 -
Lapu2g00837 303 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 303 - -
Lapu2g00837 303 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lapu2g00837 303 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00837 Lapu-Chr2 7621653 7625107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00837 11 301 Monolignol Biosynthesis Gene Families AT5G58490 31.210 8.55e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00837 - - pvu:PHAVU_002G140100g 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00837 2 7621653 7625107 Lapu2g00837 2 7621653 7625107 ECH