Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00816 ATGGGAGATGTGGCAAAGGACCTAACAGCTGGGACTATTGGAGGGGCAGCACAATTGATAGTTGGACACCCATTTGACACCATCAAGGTCAAGCTCCAAAGCCAACCTACACCCCTCCCCGGCCAGCTTCCCAGGTATTCTGGTGCAATTGATGCTGTCAAGCAGACAGTGGCAGCTGAAGGTCCAAGGGGTTTATACAAGGGTATGGGAGCCCCACTTGCCACAGTAGCAGCCTTCAATGCTGTTCTGTTTACAGTTAGGGGGCAAATGGAAACATTACTGAGGTCGCATCCTGGTGCTACCCTCACAGTAAATCAGCAGGTTGTTTGTGGAGCTGGAGCTGGAATTGCTGTTTCCTTTCTGGCTTGCCCTACTGAATTGATCAAATGCAGATTGCAAGCACAAAGTGCATTAGCTGGCACTGGAACAGCCACCATGGCAGTGAAATATGGGGGACCCATGGATGTGGCCAGGCAAGTTCTGAGGGCAGAAGGAGGCGTAAAAGGTCTGTTCAAGGGCTTGGTTCCCACCTTGGCTCGCGAAGTGCCTGGAAATGCTGCAATGTTTGGTGTATATGAAGCATTAAAACGATTACTTGCTGGAGGCACTGATACCTCGGGACTGGATAGAGGTTCTCTGTTGCTTGCTGGAGGCTTGGCTGGAGCTGCCTACTGGCTCGCAGTTTACCCAACTGATGTTGTTAAGAGTGTGATTCAAGTAGATGATTACAAAAACCCGAAGTTCTCTGGCTCAATTGATGCTTTCAGAAGAATTTCAGCTTCGGAGGGATTCAAAGGCCTATATAAGGGTTTTGGTCCAGCAATGGCCCGAAGTGTTCCTGCTAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGTATGA 894 0.4944 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQLPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMETLLRSHPGATLTVNQQVVCGAGAGIAVSFLACPTELIKCRLQAQSALAGTGTATMAVKYGGPMDVARQVLRAEGGVKGLFKGLVPTLAREVPGNAAMFGVYEALKRLLAGGTDTSGLDRGSLLLAGGLAGAAYWLAVYPTDVVKSVIQVDDYKNPKFSGSIDAFRRISASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALV* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00816 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Lapu2g00816 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Lapu2g00816 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Lapu2g00816 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Lapu2g00816 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Lapu2g00816 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Lapu2g00816 297 Gene3D Mitochondrial carrier domain 102 297 IPR023395 -
Lapu2g00816 297 Gene3D Mitochondrial carrier domain 2 101 IPR023395 -
Lapu2g00816 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Lapu2g00816 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 295 - -
Lapu2g00816 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00816 Lapu-Chr2 7420156 7423873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00816 22 291 Antiporters AT1G79900 33.696 7.31e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00816 K15109 - gmx:100787332 536.569