Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00802 ATGATGGAGTTACCAGAAATTTGGATATTGAGACTGGTTGTGGCATGGGCTGTTTGTCTGCTTATATTTATCAGATCAGTTTCTGCCTCTGCAACTGAAGGGTTTGAAAACATAGCATGTTGTGCTGATTCGAATTACACAGATCCACAGACCACCTTAAATTACAAAACAGATTACACGTGGTTCCCTGACAGAGGAAGCTGCAGAAGACCTAAAATTGAGTTGAATGAAAAAGTTCGACTGTTTTCTATAGATGAAGGAAAGAGATGTTACAATTTGCCAACAATTAAGAACAGAGTATATCTGATAAGGGGCACATTTCCATTTGACAGTGTAAATTCTTCCTTTAATGTTTCAATTGGGGTAACACAATTAGGTGCAGTGAGACCATCCACGCCCCAGGACTTGGAGATTGAGATTGAGGGAGTTTTTAGGGCTACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTGGATCCCTTTATTTCTCAGCTGGAATTAAGGCCATTGCCTGAAGATTACCTACTACATGATTTGCGTGCCAGTGTTTTAAAATTGATAAGTAGAAAAAGTCTTTGGGGCACAAAAGATGAAATCAGGTTCCCAAATGACCCAATTGATAGAATGTGGAAAGGAACTTCAAGTCCATCATCTGCTCTCCTGTTTTCTAACAATGTTAGCAATTTTGACCTCAAATCTAACATGACACCACCTCTACAAGTCCTACAAACAGCTCTTACCGACCATGAGCGATTGGAGATCCACAGTAGCCTTGACACTGAGGAATATGAATATCGCGTATTTCTCTACTTCCTTGAATTAAATAGCACTGTCGAAGAAGGAAAAAGGGTGTTTGACATCTATATTAATAGTGAGATTCAAAGGGAGAAATTTGACATATTGGCTACAGGGTCCAACTATACATACACTGTCTTGAACGTTTCAGCAAATGGCTTCCTTAATTTAACCTTGGTCAAGGCATCTGGTGCTGAGTTTGGACCACTTTTGAATGCTTATGAGATCTTGCAAATGCGATCATGGATTGAAGAGACCAACCAAAAAGATGTGAAAGTGATTCAGAAGATTAGAGAAGAATTGTTGTTGCAAAACCAAAACAATAAAATGCTAGAGAGTTGGACCGGAGACCCTTGTATTTTCCCCTGGCACGGAATAGCGTGTGATGGTTCAAATGGCTCGTCTGTTATCACCAAGCTGGATCTTTCCTCAAGTAATTTCAAAGGACCAATTCCTTCTACTGTTACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAACAATTTCAATGGTTATATTCCCTCGTTTCCATCGTCCTCCTTGTTGATATCAATAGACCTAAGTTACAATGATCTTATGGGGTCACTTCCAGAATCAATTGTCTTACTGCCATATTTAAAATCTTTGTATTTTGGCTGCAACAAACGCATGAGTGAAGACACTCCAGCTAATTTGAATAGTTCACTTGTCAATACAGATTACGGAAGATGCAAAGCAAAAGAACCTAGATTTGGACAAGTATTTGTCATTGGTGCTATTACCTGTGGATCACTTTTGATTACATTGGCAGTTGGGATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACTTAATGGAAACAAATGTAATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAAACATTCACTTTGGAATATATAGAGGTGGCTACAGAAAGCTACAAAACTTTGATAGGGGAAGGTGGATTTGGTTCTGTTTACCGGGGCACTCTAAATGACGGTCAAGAAGTGGCAGTGAAAGTCCGTTCAGCCACATCAACTCAGGGAACTCGAGAATTTGATAATGAGCTAAACTTACTTTCAGCAATACAGCATGAAAACCTAGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTCGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACAAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGCAAAAATCATAGTGATGAAGCTTTACTGATTTACAACGATGGGGAAATCATATTGGTCTCAGGTTTGGCATATCTTCACACATTTCCAGGACGTTCAGTAATACACAGGGACGTGAAATCAAGCAATATACTTCTAGATCATAGCATGTGCGCTAAGGTTGCCGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTAACGTTTCTCTTGAAGTCAGAGGAACTGCCGGGTACCTGGATCCTGAATACTACAAAACCCAACAATTATCTGAGAAGAGTGATGTCTTCAGCTTTGGCGTGGTTTTACTTGAACTTGTGACTGGTAGGGAACCTCTTGACATAAAGAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAGCCGTATATAAGAGCATCAAAGATGGAGGAAATTGTGGATCCTGGCATCAAGGGGGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGCAGCACTGCAATGTCTTGAACCATTCTCAGCATATAGACCAAGCATGGTGGACATTGTCCGTGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAGTACATGAAGTCCATTGACAGCCTCGGAGGATCCAACCGCTACTCTATTGTCATAGAGAAAAGAGTGCTGCCCTCAACTTCATCAACAGCAGAATCAACCATCACAACCCAAGCCTTGTCCCATCCACAGCCGAGATAG 2829 0.4072 MMELPEIWILRLVVAWAVCLLIFIRSVSASATEGFENIACCADSNYTDPQTTLNYKTDYTWFPDRGSCRRPKIELNEKVRLFSIDEGKRCYNLPTIKNRVYLIRGTFPFDSVNSSFNVSIGVTQLGAVRPSTPQDLEIEIEGVFRATKDYIDFCLVKGEVDPFISQLELRPLPEDYLLHDLRASVLKLISRKSLWGTKDEIRFPNDPIDRMWKGTSSPSSALLFSNNVSNFDLKSNMTPPLQVLQTALTDHERLEIHSSLDTEEYEYRVFLYFLELNSTVEEGKRVFDIYINSEIQREKFDILATGSNYTYTVLNVSANGFLNLTLVKASGAEFGPLLNAYEILQMRSWIEETNQKDVKVIQKIREELLLQNQNNKMLESWTGDPCIFPWHGIACDGSNGSSVITKLDLSSSNFKGPIPSTVTEMTNLKILNLSHNNFNGYIPSFPSSSLLISIDLSYNDLMGSLPESIVLLPYLKSLYFGCNKRMSEDTPANLNSSLVNTDYGRCKAKEPRFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLIKSVSIQTFTLEYIEVATESYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGKNHSDEALLIYNDGEIILVSGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLELVTGREPLDIKRPRNEWSLVEWAKPYIRASKMEEIVDPGIKGGYHAEAMWRVVEAALQCLEPFSAYRPSMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALSHPQPR* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00802 942 Gene3D Ribonuclease Inhibitor 357 511 IPR032675 -
Lapu2g00802 942 Pfam Malectin-like domain 42 345 IPR024788 -
Lapu2g00802 942 Gene3D - 197 347 - -
Lapu2g00802 942 CDD STKc_IRAK 598 886 - -
Lapu2g00802 942 SUPERFAMILY L domain-like 371 487 - -
Lapu2g00802 942 Gene3D Phosphorylase Kinase; domain 1 564 667 - -
Lapu2g00802 942 Gene3D Transferase(Phosphotransferase) domain 1 668 902 - -
Lapu2g00802 942 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 717 898 - -
Lapu2g00802 942 Pfam Protein tyrosine and serine/threonine kinase 596 885 IPR001245 GO:0004672|GO:0006468
Lapu2g00802 942 FunFam Nodulation receptor kinase 557 667 - -
Lapu2g00802 942 SMART serkin_6 592 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00802 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Lapu2g00802 942 PANTHER OS07G0107800 PROTEIN-RELATED 38 889 - -
Lapu2g00802 942 ProSitePatterns Protein kinases ATP-binding region signature. 598 620 IPR017441 GO:0005524
Lapu2g00802 942 ProSiteProfiles Protein kinase domain profile. 592 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00802 942 FunFam Leucine-rich repeat receptor-like kinase 356 496 - -
Lapu2g00802 942 SUPERFAMILY Protein kinase-like (PK-like) 573 885 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00802 Lapu-Chr2 7212420 7220868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00802 17 892 Receptor kinase-like Gene Family AT1G67720 32.896 3.06e-127 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lapu2g00802 Malectin_like 3.4e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00802 - - gmx:100781986 1627.45