Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00795 ATGGCTTTCCCCAACTCAAAATCTCTCAGTCCTCTTTCCATTCTACTTACCAAATTCCTCGTCCCTTTTCTCTTGCTTCGACATTACAGTGCACAACCATCCCCACTGTCGGCAGACGAAACCGTTTCCTTCGCCTTCTCTCTTTTCGACCAAGATAATCCAAACATAGTATTATTGGGCAATGCCTCAATATCTGATGGGGTTCTAAGGTTAACCAACACCGACCAACTTGGCAAACCAGTTCCACACAGTGTTGGCCAAGCAGTGCATATCACACCAATACATCTCTGGGACAAAAACAACGGAGAACTCGCAGACTTCAGCTCTGGCTTCTCCTTTGTCGTGAATCCTAATGGTTCAACCCTTCATGCGGATGGTTTTGCCTTCTTTCTTGCACCAGCCAACCTTCACTTACCCAAAAACTCAAGTGGAGGCTATCTTGGACTTTTCAGCCCAGAAACTGCATTGGACCCTTCCAAAAACCAAATAGTGGCTATTGAGTTTGATAGTTATACCAACGATTGGGACCCCAATTCACCTTCTCAGTCTCCTCACATTGGAATCGATGTTGACTCTGTTAAGTCAGTGGCAACTGTGGCATGGCCAAGTGAACTTGAACCGGATAATGCTGTGGCACATGCGAGCATAAACTATAACTCTGAGTCCAAGAGTTTGAGTGTGTTTGTGGCTTACCCTGGGGACAACAGGAACGCCACTGTCTCTACTGTCGTTGATTTGAGAACTGTTTTGCCGGAATGGATCAGAGTTGGTTTCTCTGCCGCCACCGGTGAGTTGGTTGAAACTCATGACATGTTCACGAGCACTCACTATGCTGGCAAAGATTTAAACATGAATTTTGATAAAGGGGAAACTTATAAAAAAGTTTTTGGCCCCATTTTTGTTTATCTTAACTCTGCTCCAAACAAAGCTCGGTTCCGGTATCTGTGGTCAGATGCTGTAAAACAGTTATCCAATGAAGTCAGAAAATGGCCTTATGATTTCGTTGGATCAAAAGATTTCCTTCCACGCAATCGACGGGGAACAGTGTCAGGACGACTACAAGTCCAAGATAGGATAAGGAAAGCTCAACCTGCTAAATATGCTTACGTTGGACTAGCTTTGCCTGGAAATGCAGGATCATGGCAGAAAGAATGCAAGGAAATTGGGATCCCTGATCGTTCAGCTGCGGAATTCTATGTACCAGATCCTAACCCTGGGCTCAGGAACGAACTGTACCCTAACAATGGCCCAGACAAGTTTAGGCAATATGGCTTGTGGGCACGTTACACCGAGTTATATCCAAAATATGATCTCATTTACACTGTCGGTGTTTCTGACTATCATAAAGATTGGTTTTATGCTCATGTTACCAGGTAA 1377 0.4452 MAFPNSKSLSPLSILLTKFLVPFLLLRHYSAQPSPLSADETVSFAFSLFDQDNPNIVLLGNASISDGVLRLTNTDQLGKPVPHSVGQAVHITPIHLWDKNNGELADFSSGFSFVVNPNGSTLHADGFAFFLAPANLHLPKNSSGGYLGLFSPETALDPSKNQIVAIEFDSYTNDWDPNSPSQSPHIGIDVDSVKSVATVAWPSELEPDNAVAHASINYNSESKSLSVFVAYPGDNRNATVSTVVDLRTVLPEWIRVGFSAATGELVETHDMFTSTHYAGKDLNMNFDKGETYKKVFGPIFVYLNSAPNKARFRYLWSDAVKQLSNEVRKWPYDFVGSKDFLPRNRRGTVSGRLQVQDRIRKAQPAKYAYVGLALPGNAGSWQKECKEIGIPDRSAAEFYVPDPNPGLRNELYPNNGPDKFRQYGLWARYTELYPKYDLIYTVGVSDYHKDWFYAHVTR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00795 458 CDD lectin_legume_LecRK_Arcelin_ConA 42 276 IPR001220 GO:0030246
Lapu2g00795 458 Gene3D - 39 284 - -
Lapu2g00795 458 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 270 387 - -
Lapu2g00795 458 SUPERFAMILY Galactose-binding domain-like 387 458 IPR008979 -
Lapu2g00795 458 Pfam Legume lectin domain 42 271 IPR001220 GO:0030246
Lapu2g00795 458 Pfam Polysaccharide lyase family 4, domain III 387 458 IPR029411 -
Lapu2g00795 458 SUPERFAMILY Concanavalin A-like lectins/glucanases 40 273 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00795 Lapu-Chr2 7130556 7149551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00795 272 458 Polysaccharide Lyase AT4G38030 40.467 1.82e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00795 - - gmx:100780546 421.779