Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00759 ATGATTTCTTCTGTCGCCTTTCAACCTTCTCTTCCCGCAGTAAACTTCTCCGGCAACGCCCTGGCCTCGCCCTCCTGTCGCGTCAGATCCCGGCCAATAGTCGCCTTCGCCACCGCCACCGCCACCGCCACTGCAACCGAGGAAGCTCGCTCTTCTTGGACGGACAAGCCACGCCCTTCCTATCTCAATTCCTCCTGCTCTTCCCTCTACGATATCCTCGGTATCCCCGCCGGTGCCTCCAGCCAGGAAATCAAGGCCGCGTACCGGCGATTGGCCAGAGTCTGCCACCCGGACGTGGCAGCGATCGACCAGAAAAACTCCTCGGCGGACGAATTCATGAAGATCCACGCCGCGTACTCAACTCTCTCAGATCCTGACAAACGCGCCAACTACGATCGGAGCCTCTTCCGGCAACAACGGCCGCTGTCTACTGCGTCGGTGTTCTCTGGTTACACGCGACGGAACTGGGAAACGGATCAGTGCTGGTAG 489 0.5951 MISSVAFQPSLPAVNFSGNALASPSCRVRSRPIVAFATATATATATEEARSSWTDKPRPSYLNSSCSSLYDILGIPAGASSQEIKAAYRRLARVCHPDVAAIDQKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRQQRPLSTASVFSGYTRRNWETDQCW* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00759 162 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Lapu2g00759 162 SMART dnaj_3 67 127 IPR001623 -
Lapu2g00759 162 CDD DnaJ 70 124 IPR001623 -
Lapu2g00759 162 SUPERFAMILY Chaperone J-domain 65 139 IPR036869 -
Lapu2g00759 162 PRINTS DnaJ domain signature 107 127 IPR001623 -
Lapu2g00759 162 PRINTS DnaJ domain signature 70 88 IPR001623 -
Lapu2g00759 162 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lapu2g00759 162 Pfam DnaJ domain 69 132 IPR001623 -
Lapu2g00759 162 ProSiteProfiles dnaJ domain profile. 68 135 IPR001623 -
Lapu2g00759 162 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 18 142 - -
Lapu2g00759 162 Gene3D DnaJ domain 59 155 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00759 Lapu-Chr2 6773980 6774468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00759 70 132 C2H2 Transcription Factor Family AT1G74250 41.791 2.81e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00759 - - gmx:100800959 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00759 2 6773980 6774468 Lapu2g00759 2 6773980 6774468 ECH