Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00752 ATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGAGGATGGTGGCAGTGGAAAAGGGGGCTTTCTCAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGAGCTGCCCCAACTAATGCTGCTCCTTGGAAACCTGATCAGGATCCTATTCATACCAAGTATTGTAACATTTCTTCTACAGGGATCTCTTCTGCATCAACTTCTTCTGTTGAGATGGTTACTGTCGGGCAGATGGGGAATTATGGCTACGGTTCTGTGCCCGTGGAGAAAAGTTTTAGGGACTGTTCAATATCTGCTGGTGGTAGCAGTGGCCATGTTGGAATAAACCAGAACTTGGGATGGGTCGGTGTGGATCCATATTCCTCAGCCTACGCCAACTTCTTTGACAAAATAAGGCCAACTGAAGAAACCTTGGAAGAAGAACAGGAAGAGGATGGTGCTGCTGAGATTGAAACACTTCCTTTATTCCCAATGCACGGTGAGGACATTCATGGCTATTGCAACCTCAAGCCCAATTCTTACAACTATGATGGAAACGTCTGGTATCATTCTGAAGAAGGGTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTCAATTCCTACGCCCGCAGATCTCCAGATTTCGCTTAA 840 0.4607 MEPQQPQGSQPNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRAAPTNAAPWKPDQDPIHTKYCNISSTGISSASTSSVEMVTVGQMGNYGYGSVPVEKSFRDCSISAGGSSGHVGINQNLGWVGVDPYSSAYANFFDKIRPTEETLEEEQEEDGAAEIETLPLFPMHGEDIHGYCNLKPNSYNYDGNVWYHSEEGFKNGSRASLELSLNSYARRSPDFA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00752 279 ProSiteProfiles 'Homeobox' domain profile. 24 90 IPR001356 GO:0003677
Lapu2g00752 279 SUPERFAMILY Homeodomain-like 22 96 IPR009057 -
Lapu2g00752 279 Gene3D - 23 89 - -
Lapu2g00752 279 SMART HOX_1 26 94 IPR001356 GO:0003677
Lapu2g00752 279 MobiDBLite consensus disorder prediction 1 34 - -
Lapu2g00752 279 CDD homeodomain 29 91 IPR001356 GO:0003677
Lapu2g00752 279 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 8 274 IPR044555 GO:0003700|GO:0099402
Lapu2g00752 279 Pfam Homeodomain 28 89 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00752 Lapu-Chr2 6674599 6676146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00752 22 269 Wox Gene Family AT2G17950 43.448 1.08e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu2g00752 Homeodomain 1.6e-17 CL0123