Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00746 ATGAGCAACAACAACATTAACGATTGGCGTGACAATAACATGAATAGGTTTCAAAAGCTTTGGTGCAGCGACGACGATAATGAAGAAAATCTGAGATTTAATATGCAGCCTGCAAGGAAATTGAAAACGGTTTCGTGGGCTCCTGGATCTCTTCTTTCTCAGGTAATTTTTTTCTCATCTGAGGGTTGTCCTTCAAAAGTTGGAAACAAATCTGAAGATTATTTTCAAGCAAAGACATTGTCCACATGGCCTTCAACCCTAGAATCTGGTGAAGAAAGTACTGAGAAATATGATCAGATGCTAAGAGAAATGAGAGTGTCTGAAGCATATTATCCTTGTACTTCTGCCTTTCCTCCTAGCCCTTTTGTTTCATTTAACGTGGAGAATGAATGTTACGATGATAGTCTCACTCCTGTCATCCCTCTTATTCCCATTGAGGAATATGACTCAGTAACAAATATTAAACCTGATGTTTCTGTCACAAAACATGGAGACTCTCTCTCCATACTGCAGACCCAAAATACACAGCAACACATTCCACCAGAAACATCTTCGGATGCAAATTTCGTTGTTGCTGCTGTTTTATCTGCCATCTTGAAAAGCATCGAGGAAGGAATCGAGATTGATGTTGATGTGCTCTTTAAAATAGCTAGTGACCCAGTAATGATTAGGAAAATAATGGAAGAATATTCAACTGTTACCACCAGTGGGATGAGTAACCCCTCAAGAACTGTGAGTGCAAGACAATCAACTCCATCAAATTCACTGTCGACTCTCACCCCTGAAATGTCTGAAATTCCATCTATTTCATTGCTGGCATCTGTACATGATAAGCCTGTAACTGCAACTCCAGTTGTTCCTTTGTCTGAGCCTGTATCTGCTCACACAACAACCATAACTCACTCAGTCCAAACAACAACAGCTGCACCTTATGTGCACATGCCTGTGAAAGATATCAATTACTGTAAAAACCTTGTTAGAAAATATGGTGGTAGTAATAGTCAGACAGACATGCAGAATCATAATAAGTTCCAATATTGTAAACGACCGTGTGTCCTTCATCCAGAGGAGGTGAAAATGAAAATTCAGAAATCATGCAAATACCATAGAACTTCAAGGGGTTGTCGCCATGGTTCCAATTGCCGTTATCAGCATGTGTGGAGGATGTAA 1170 0.3983 MSNNNINDWRDNNMNRFQKLWCSDDDNEENLRFNMQPARKLKTVSWAPGSLLSQVIFFSSEGCPSKVGNKSEDYFQAKTLSTWPSTLESGEESTEKYDQMLREMRVSEAYYPCTSAFPPSPFVSFNVENECYDDSLTPVIPLIPIEEYDSVTNIKPDVSVTKHGDSLSILQTQNTQQHIPPETSSDANFVVAAVLSAILKSIEEGIEIDVDVLFKIASDPVMIRKIMEEYSTVTTSGMSNPSRTVSARQSTPSNSLSTLTPEMSEIPSISLLASVHDKPVTATPVVPLSEPVSAHTTTITHSVQTTTAAPYVHMPVKDINYCKNLVRKYGGSNSQTDMQNHNKFQYCKRPCVLHPEEVKMKIQKSCKYHRTSRGCRHGSNCRYQHVWRM* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00746 389 MobiDBLite consensus disorder prediction 234 260 - -
Lapu2g00746 389 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 89 386 - -
Lapu2g00746 389 ProSiteProfiles Zinc finger C3H1-type profile. 360 388 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00746 Lapu-Chr2 6605170 6612537 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu2g00746 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00746 - - vra:106776671 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00746 2 6605170 6612537 Lapu2g00746 2 6605170 6612537 ECH