Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00742 ATGGAATTTGTACCAGTATTTGCTATGATGGAGTCGATGGAGTCATGTGTCCCACCTGGGTTCCGCTTCCACCCAACAGATGAAGAGCTTGTTGGTTACTATCTGAGGAAGAAAGTGGCTTCTCAAAAGATTGACCTTGACGTGATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGATAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCTACCATGGCGGGGTTTTGGAAGGCAACAGGAAGAGACAAAGCAGTGTATGACAAGACAAAACTAATTGGGATGAGGAAAACACTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAATCTGATTGGATCATGCACGAGTATAGGCTTGAATCAGATGAGAATGGACCTCCACAGGAGGAAGGATGGGTTGTGTGCAGAGCCTTCAAGAAGAAAACTACTGGACAAACAAAGACTATTGAAGGATGGGACTCAAGCTACTTCTTTGAGGAAGCAAGTGGTGTAAGCACTGTGGTGGATCCAATTGATCTCATTTCAAGGCAGTCTCAGAGTTTTTTAGCTCAAAATTTCATGTGTAAGCAAGAGATAGAAGCAGATAACTTGAGTTGCATGCTCCAGGATCCATTTGTACAACTTCCTCAGCTAGAAAGCCCGTCTTTGCCATTAGTGAAGAGGCCAAACACAGTGTCACTATTATCTGACAATATCGAAGATGAAGACGTTCAAAACAGGTTATCCAACAAGAACACAAAGAAAGTCACTGATTGGAGAGCTCTTGACAAGTTTGTAGCCTCTCAACTCAGTCAAGAAGACATGCATGAAACCAATGGACTCTCAAGCTTCGAACCCCATGATAGCCACGACATGGCACTGCTGCTGCTGCAGAGTAGTAGGGATGAAGGGAACAGGCTAAGCCCGTTTCTAAACACATGCTCCGACTGTGATATTGGGACATGCGTATTTGAAAAATAA 1038 0.4345 MEFVPVFAMMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQDRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTIEGWDSSYFFEEASGVSTVVDPIDLISRQSQSFLAQNFMCKQEIEADNLSCMLQDPFVQLPQLESPSLPLVKRPNTVSLLSDNIEDEDVQNRLSNKNTKKVTDWRALDKFVASQLSQEDMHETNGLSSFEPHDSHDMALLLLQSSRDEGNRLSPFLNTCSDCDIGTCVFEK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00742 345 Pfam No apical meristem (NAM) protein 18 145 IPR003441 GO:0003677|GO:0006355
Lapu2g00742 345 FunFam NAC domain-containing protein 26 170 - -
Lapu2g00742 345 Gene3D NAC domain 26 170 IPR036093 GO:0003677|GO:0006355
Lapu2g00742 345 ProSiteProfiles NAC domain profile. 17 166 IPR003441 GO:0003677|GO:0006355
Lapu2g00742 345 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 264 - -
Lapu2g00742 345 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00742 Lapu-Chr2 6573746 6578347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00742 10 344 NAC Transcription Factor Family AT2G18060 64.402 4.98e-164 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu2g00742 NAM 5.1e-38 No_clan