Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00741 ATGGTTGGTTTCAGCGGCGATGAAACTGCTCCCTTCTTCGGCTTCCTGGGCGCCGCCGCGGCCCTTGTTTTCTCCTGCATGGGGGCGGCCTACGGCACGGCCAAGAGCGGCGTCGGTGTTGCCTCCATGGGCGTCATGAGGCCGGAGCTGGTGATGAAATCGATTGTGCCGGTTGTCATGGCGGGAGTGCTCGGCATCTACGGCTTGATCATCGCGGTGATCATCAGCACGGGAATTAACCCTAAGGCCAAATCCTACTATCTCTTCGACGGCTACGCTCATCTCTCGTCTGGTCTCGCTTGCGGTCTCGCTGGTCTTTCCGCTGGCATGGCCATTGGCATCGTTGGCGACGCCGGTGTCAGGTATCGTACTTTGTGTATTACATTGGTGGAGTGGAGACGTTTATTGTACCTAGCAAATGCCCAACAGCCAAAGCTTTTTGTTGGGATGATTCTGATTCTCATCTTTGCTGAGGCATTGGCGTTGTATGGTCTCATTGTTGGAATCATCCTCTCTTCACGCGCTGGCCAATCCAGAGCTGATTAG 546 0.5513 MVGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYRTLCITLVEWRRLLYLANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00741 181 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 177 - -
Lapu2g00741 181 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lapu2g00741 181 Pfam ATP synthase subunit C 96 171 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lapu2g00741 181 SUPERFAMILY F1F0 ATP synthase subunit C 86 172 IPR035921 -
Lapu2g00741 181 SUPERFAMILY F1F0 ATP synthase subunit C 13 76 IPR035921 -
Lapu2g00741 181 FunFam V-type proton ATPase proteolipid subunit 10 178 - -
Lapu2g00741 181 NCBIfam V-type ATPase subunit C 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Lapu2g00741 181 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Lapu2g00741 181 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 132 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lapu2g00741 181 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lapu2g00741 181 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lapu2g00741 181 Gene3D - 10 178 IPR035921 -
Lapu2g00741 181 CDD ATP-synt_Vo_c_ATP6C_rpt2 88 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00741 Lapu-Chr2 6561866 6564083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00741 3 181 Primary Pumps ATPases(2) AT1G75630 83.673 2.30e-106 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00741 K02155 - gmx:100776231 275.404