Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00740 ATGCCGCTTCTTCTCCTCCTCGTGGTGTTGTGGGCACCGCTCTTGACGTGCGCCGATCGCAGCGCCGTTACTGTTGTGGAGATCCAAGCCTTGACGTCCTTTAAACTCGACCTTCACGACCCCGTCGGAGCTCTCGACGGTTGGGATCCAACGTCGCCGGCGGCACCATGCGACTGGCGCGGAGTCTCTTGCACCAATGGCCGAATCACGGAGTTGCGCCTGCCTCGTCTTCAACTTGGTGGCAGACTCAGTGATCGTGTCTCCGAGTTACGCATGCTACGCAAGATTAGCCTTCGCTCCAACAACTTCAACGGAACCATTCCTTCGTCTCTCTCCAAATGTACACTCTTACGGTCGTTGTTCCTGCAGGAGAATTCGTTTACCGGCAACCTTCCGACGGAGATCGCAAACCTCACTGGCCTTCAGATTCTCAACGTCGCGCTAAACCGCCTCTCCGGCAGTATCCCTGGCCTTCTCCCTCTGGGCCTCAAAGCCCTCGACCTCTCGTCGAACGTCTTCTCCGGCGAGATTCCGAGCTCCATATCGAACCTCTATCAGCTTCAGTTGATAAACCTGTCATACAACCAGTTCTCCGGCGAGATTCCCGCGAGCCTCGGGGATCTTCAGCAGCTTCAGTACCTCTGGCTGGACCACAATCTCCTTGGAGGTACGCTTCCTTCGGCGCTCGCAAATTGTTCTGCGCTTCTGCATCTGAGCGTGGAAGGAAACGCGCTTAGCGGCGTGATTCCGTCGGCGATTTCGGCGCTTCCGAGACTTCAGGTGATGTCTCTGTCTCAGAACAACTTCACCGGCTCCATTCCAGCTTCTGTTTTCTGCAATGGTTCGGTCCACGCGCCCTCGCTGCGGATTGTTCACCTCAGTTTCAACGGTTTCGTGGATTTCGTGGGGCCTGAGATGAGCACGTGTATCAGTGTTCTTCAGGTTTTGGATATTCAGCACAATCGCATACGAGGCACGTTTCCGCTGTGGTTGACCAACGTGACCACGTTGACCGTGCTTGATTTGTCGAACAATGCACTTTTTGCCGAGGTTCCTCCTCAAATAGGAAACCTTGTTAAGTTGGAGGAGTTGAAGATGGCTAATAATTCCTTTACGGGTACCATTCCGGTGGAACTGAAGAAATGTGGCTTCCTAAGTGTCGTTGATTTTGAAGGTAACGAGTTTGGCGGAGAAGTTCCTTCGTTTTTGGGTGATGTGACGGGGCTGAAGGTGCTATCTCTTGGTGGGAACCACTTCTCTGGTGCGGTTCCGGTGAGTTTTGGAAACCTTTCATTTCTTGAAATATTGAGTTTGAGAGGTAACAGGTTGAATGGAAGTATGCCTGAGATGATAATGAGATTGAACAATTTGACGATACTGGACCTCAGTGGAAACAAATTTACGGGTCAAGTTTATTCGAGTATTGGGAATTTGAATAAGTTGATGGTTCTGAATCTTAGTGGCAATGGCTTCTCTGGAAAAATTCCTGCTAGTTTGGGGAATCTTTTCAAGCTAACAACGCTTGATTTGAGCAAACAGAATCTTTCTGGAGAGTTACCGCTTGAGCTCTCGGGATTGCCCAGTCTGCAAGTTGTTGCGTTGCAGGAAAACAAGTTATCCGGTGATGTGCCTGAAGGGTTTAGCAGTTTGACGAGTTTGCAGTATGTGAATCTCAGTTCTAATGCTTTTACCGGGCATATTCCTGAAAATTATGGCTTTCTTCGTTCCTTGCTTGTTCTTTCGTTATCTGGTAATCACATTACAGGAGCAATCCCTTCGGAAATAGGAAACTGCTCTGGTCTTGAAATTCTTGAGCTTGGATCAAACTCTCTGGCAGGTCGCGTTCCTGCTGATCTCTCTCGCCTAACCCTTTTGAGAGTTCTTGATTTGAGTGGAAACAATTTAACTGGGGATGTGCCTGAGGAAATCTCCAAATGCTCGGGGTTAACCACTTTGCTGGTGGATCACAACCATCTTTCTGGGGATATACCCGGGTCCTTGTCGAATCTATCAAACCTGACAATGCTAGATCTCTCTGCTAACAACTTGAGTGGGGAAATTCCAAGCAATCTTTCTATGATTCCCGGTTTAGTGTTCTTAAATGTCTCGGGAAATAACTTGGACGGTGAGATACCACCAACATTGGGATCTCGGTTCAGTAACCCCGATGTATTCGCAGATAATCAGGGTTTATGTGGGAAGCCATTGGATAAGAAATGCAAAGATATAAATGGTAAGGACAGAAAGAGGATGATTGTGCTTGTGGTTGTCGTTGCTTGTGGAGCTTTTATACTGGTTCTGTTTTGCTGCTTTTATGTGTTCAGTTTATTGAGATGGCGTAAAAGACTGAAACAGGGAGTATCGGGTGAAAAGAAAAAGAGTCCCGCTAGAGCCAGTTCTGGAACAAGTGGAGGTCGTAGCAGCACTGAGAGTGGGGGACCAAAACTAGTGATGTTCAACACCAAAATTACACTTGCGGAGACCATTGAAGCTACAAGACAATTCGACGAAGAGAACGTGCTGAGCAGAACAAGGTATGGATTAGTGTTCAAAGCCTGTTACAACGATGGAATGGTCCTCTCCATTCGCAGGCTCCAAGATGGATCATTGGATGAAAACATGTTTAGAAAAGAAGCTGAATCACTAGGCAAAGTGAAGCACCGAAATTTAACGGTTCTCAGAGGTTACTATGCTGGGCCACCTGACATGAGACTCCTAGTCTACGATTACATGCCCAATGGAAACCTCGCAACCCTCCTCCAAGAGGCTTCTCACCAAGATGGTCATGTTCTAAATTGGCCAATGCGACACCTCATTGCACTGGGCATTGCCCGTGGTTTAGCCTTCCTACACCAATCTTCAATGGTCCACGGCAACGTGAAACCACAAAATGTCCTATTCGATGCAGATTTCGAAGCCCATTTATCAGATTTCGGATTAGACAAGTTAACAGTAGTCACCACCTCAGGGGAAGCCTCAACTTCAGCATCCGTTGGCACGTTGGGTTACGTTTCTCCAGAAGCAGTCTTAACCGGGGAAGCCACAAAGGAGAGTGATGTTTACAGCTTTGGCATTGTGTTGTTGGAACTGTTGACCGGAAAACGACCCGTCATGTTCACCCAGGACGAAGACATAGTGAAGTGGGTAAAAAAACAACTGCAAAGGGGTCAAATAACAGAGCTATTAGAACCTGGTTTGCTTGAGTTGGACCCAGAATCATCAGAGTGGGAAGAGTTTTTACTGGGTGTAAAAGTTGGGTTACTTTGCACAGCACCTGACCCTCTTGATCGACCAACCATGTCTGACATTGTTTTCATGCTTGAAGGCTGCCGAGTCGGTCCTGATATCCCATCCTCTGCAGATCCAACCTCCCAACCTTCTCCGGCCTAA 3390 0.4811 MPLLLLLVVLWAPLLTCADRSAVTVVEIQALTSFKLDLHDPVGALDGWDPTSPAAPCDWRGVSCTNGRITELRLPRLQLGGRLSDRVSELRMLRKISLRSNNFNGTIPSSLSKCTLLRSLFLQENSFTGNLPTEIANLTGLQILNVALNRLSGSIPGLLPLGLKALDLSSNVFSGEIPSSISNLYQLQLINLSYNQFSGEIPASLGDLQQLQYLWLDHNLLGGTLPSALANCSALLHLSVEGNALSGVIPSAISALPRLQVMSLSQNNFTGSIPASVFCNGSVHAPSLRIVHLSFNGFVDFVGPEMSTCISVLQVLDIQHNRIRGTFPLWLTNVTTLTVLDLSNNALFAEVPPQIGNLVKLEELKMANNSFTGTIPVELKKCGFLSVVDFEGNEFGGEVPSFLGDVTGLKVLSLGGNHFSGAVPVSFGNLSFLEILSLRGNRLNGSMPEMIMRLNNLTILDLSGNKFTGQVYSSIGNLNKLMVLNLSGNGFSGKIPASLGNLFKLTTLDLSKQNLSGELPLELSGLPSLQVVALQENKLSGDVPEGFSSLTSLQYVNLSSNAFTGHIPENYGFLRSLLVLSLSGNHITGAIPSEIGNCSGLEILELGSNSLAGRVPADLSRLTLLRVLDLSGNNLTGDVPEEISKCSGLTTLLVDHNHLSGDIPGSLSNLSNLTMLDLSANNLSGEIPSNLSMIPGLVFLNVSGNNLDGEIPPTLGSRFSNPDVFADNQGLCGKPLDKKCKDINGKDRKRMIVLVVVVACGAFILVLFCCFYVFSLLRWRKRLKQGVSGEKKKSPARASSGTSGGRSSTESGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGNVKPQNVLFDADFEAHLSDFGLDKLTVVTTSGEASTSASVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00740 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 625 740 - -
Lapu2g00740 1129 SUPERFAMILY RNI-like 399 717 - -
Lapu2g00740 1129 Pfam Protein kinase domain 845 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00740 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1115 - -
Lapu2g00740 1129 FunFam Nuclear pore complex protein NUP107 24 159 - -
Lapu2g00740 1129 Pfam Leucine Rich Repeat 480 502 IPR001611 GO:0005515
Lapu2g00740 1129 Gene3D Ribonuclease Inhibitor 278 473 IPR032675 -
Lapu2g00740 1129 Gene3D Transferase(Phosphotransferase) domain 1 911 1115 - -
Lapu2g00740 1129 SMART LRR_typ_2 90 114 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 430 453 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 256 280 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 574 598 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 454 477 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 670 701 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 478 502 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 550 572 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 526 549 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 334 358 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 622 646 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 138 161 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 406 429 IPR003591 -
Lapu2g00740 1129 SMART LRR_typ_2 208 232 IPR003591 -
Lapu2g00740 1129 Gene3D Ribonuclease Inhibitor 25 159 IPR032675 -
Lapu2g00740 1129 Gene3D Ribonuclease Inhibitor 160 276 IPR032675 -
Lapu2g00740 1129 SUPERFAMILY L domain-like 79 377 - -
Lapu2g00740 1129 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 357 1109 - -
Lapu2g00740 1129 Pfam Leucine rich repeat 648 707 IPR001611 GO:0005515
Lapu2g00740 1129 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Lapu2g00740 1129 Pfam Leucine rich repeat 163 221 IPR001611 GO:0005515
Lapu2g00740 1129 Pfam Leucine rich repeat 576 635 IPR001611 GO:0005515
Lapu2g00740 1129 Pfam Leucine rich repeat 313 370 IPR001611 GO:0005515
Lapu2g00740 1129 MobiDBLite consensus disorder prediction 795 815 - -
Lapu2g00740 1129 Gene3D Ribonuclease Inhibitor 474 748 IPR032675 -
Lapu2g00740 1129 Gene3D Phosphorylase Kinase; domain 1 806 910 - -
Lapu2g00740 1129 FunFam Uncharacterized protein 256 472 - -
Lapu2g00740 1129 PRINTS Leucine-rich repeat signature 670 683 - -
Lapu2g00740 1129 PRINTS Leucine-rich repeat signature 625 638 - -
Lapu2g00740 1129 SMART LRR_sd22_2 334 360 - -
Lapu2g00740 1129 SMART LRR_sd22_2 622 651 - -
Lapu2g00740 1129 SMART LRR_sd22_2 454 480 - -
Lapu2g00740 1129 SMART LRR_sd22_2 670 693 - -
Lapu2g00740 1129 SMART LRR_sd22_2 208 234 - -
Lapu2g00740 1129 ProSiteProfiles Protein kinase domain profile. 835 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00740 1129 MobiDBLite consensus disorder prediction 788 815 - -
Lapu2g00740 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Lapu2g00740 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 473 567 - -
Lapu2g00740 1129 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Lapu2g00740 1129 SUPERFAMILY Protein kinase-like (PK-like) 815 1117 IPR011009 -
Lapu2g00740 1129 FunFam Inactive leucine-rich repeat receptor-like protein kinase 160 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00740 Lapu-Chr2 6553837 6558681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00740 3 1129 Receptor kinase-like Gene Family AT4G36180 69.508 0.0 1513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Lapu2g00740 Pkinase 2.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00740 - - gmx:100795838 1945.24