Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00717 ATGGCGGGTTTATTCTCACTAGGAGGTAGAGGGAACACCAACAGCGAAGAGGAAATTCCTCCCCCTCCTGATACCTTATACTGGTATAATAGTAATAATAACAAGAATGACGATGTTTCTTCTTATCAACGAGGTGGTGGCTTTGAGCTATGGAACCAACAGCAGTTACAACACCAGCAACAACACCTTATGGCCCAGGGCCCTCCACAGCCGCGACCCCTCTTCCACCAAGATCTATACTCCGCCCTGGGCGTTGGACCCAGCAGGCCCATCTCCGATGATCAGTCATCGTCGAGATCCGGCTTCATGCTGGGTGGAAGTGGGAGTGGAAGCGGTGGGATTAGCTGTCAGGACTGTGGGAACCAAGCTAAAAAGGATTGCCCTCACATGCGGTGCAGAACATGCTGCAAGAGCCGTGGCTTTGATTGCCAAACCCATGTCAAGAGCACATGGGTCCCCGCTTCACGCCGCCGTGAGAGACAACAGCAACTCTCCGCTTTGCAACAAAACATGGAAACTTCTGGAGACCTTCCCAAAAGGCAGAGGGAGAGAGATCATAATAACCCCACCTCCTCTTCTCCTCTCGCCTGCACTCGCTTGCCTTCCAATCCCTCCTCCTCAGGGTTAGAGGAGGTGAATTTTCCGGCGGTGGTGAGATCTTCTGCGGAGTTCAGGTGTGTACGTGTGAGCTCGATGGACGAGGCGGAGGAGGAGTATGCGTACTCAACTGCTGTGAACATTGGAGGGCATGTGTTCAAAGGGATCTTATATGACTATGGTCCAGAAGGTAACGGTAATTACATGGGTGGTGCTGGGGATAGCTCGTCCACCGGTGTTGGAGGCTTGAACCTCACTTCTGGTGCTGTTGTCTCAGAGCCACTCCTTGATCCTTCTTCTTCCTTGTATCCGGCTCCTCTTAACACCTTCATGCCTGGTAGCGGTACGCAATTCTTCCCTCACCCACGATCTTGA 972 0.5247 MAGLFSLGGRGNTNSEEEIPPPPDTLYWYNSNNNKNDDVSSYQRGGGFELWNQQQLQHQQQHLMAQGPPQPRPLFHQDLYSALGVGPSRPISDDQSSSRSGFMLGGSGSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASRRRERQQQLSALQQNMETSGDLPKRQRERDHNNPTSSSPLACTRLPSNPSSSGLEEVNFPAVVRSSAEFRCVRVSSMDEAEEEYAYSTAVNIGGHVFKGILYDYGPEGNGNYMGGAGDSSSTGVGGLNLTSGAVVSEPLLDPSSSLYPAPLNTFMPGSGTQFFPHPRS* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00717 323 MobiDBLite consensus disorder prediction 153 175 - -
Lapu2g00717 323 NCBIfam putative zinc finger domain, LRP1 type 115 157 IPR006510 -
Lapu2g00717 323 NCBIfam LRP1 C-terminal domain 214 261 IPR006511 -
Lapu2g00717 323 Pfam Domain of unknown function (DUF702) 113 262 - -
Lapu2g00717 323 MobiDBLite consensus disorder prediction 90 107 - -
Lapu2g00717 323 MobiDBLite consensus disorder prediction 188 209 - -
Lapu2g00717 323 MobiDBLite consensus disorder prediction 153 209 - -
Lapu2g00717 323 MobiDBLite consensus disorder prediction 86 107 - -
Lapu2g00717 323 MobiDBLite consensus disorder prediction 1 45 - -
Lapu2g00717 323 MobiDBLite consensus disorder prediction 26 45 - -
Lapu2g00717 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 307 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00717 Lapu-Chr2 6287067 6291044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00717 1 323 C2H2 Transcription Factor Family AT3G51060 45.802 3.46e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lapu2g00717 DUF702 1.7e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00717 - - gmx:100814589 487.263