Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00709 ATGGGATTGTATTCTCATAACTCTTTTTCTTCTTTTAAATCAGCATCATCATGGTTCGAGGTATATGCGGCCTTCTCCACACTCATGATTCTCCTCAGAACTGCAATCAATGATCTCATACCCCATCAATTTCGATCCTTCATTGCCTCAAAGCTAGAGGCCTTCTTCTCCAAATATCAAGCAAAGAGCAACGTCTTTGTCAAAATTAATCAATTTTGGGACGAAAGTACTGGAGAGCGCAATGAACTTTTCGATGCTGCCTTGGAGTACCTACCCACCAAGATTAGTCACACCTACAAATCGCTCAAAGTTGGCAGGCTGCCAAACCGTAAACACCTTGAGCTTGCAGTGGATGGAAGTGAAGATGTGGTGGACGAATTTGAAGGCATCAAATTCACTTGGAAGCTGGATGAAGGGTCCAATGAGGAGTCTAACAATTACAGGAAGCATAACTTTGTATTAACCTTCAACGAGAAACAAAGAGAGAGGGTATTGGATCGGTATATTCCACATGTTCTTAAAACCTATGAGGCCATGAAAGATCAGAGAAGGATTGTAAAAATCTATTCCAGATTAGATAACTATTGGAACGAAAGTGAGTTATCACATCCTTCCACATTTGACTCACTAGCCTTGAGTCCTGAGTTGAAGAAAGATATACTTGATGATTTGGCTCGATTCTTGGGGAAGAAGGACCTTTACAAGAAAGTGGGGAAGCCTTGGAAGCGGGGCTACTTGTTGTATGGACCCCCCGGAACTGGAAAATCTAGCCTTATTGCAGCTATGGCCAACTACTTGAAATTCGATGTGTATGATTTGGAGCTTTCTTCTATTTACTCTAACTCGGACCTCATGAGATCCATGAAGGAAGCATCTAACCGTTGCATCGTCGTGATTGAAGACATAGACTGCAACAAAGAAGTGCACACAAGATCAAAACCAAATTATCCTTCTGTTAATATAGATTCAGACTCTGACAATGAAGGTCCCAAGATGAGGTCACAGGGCTTTACTCTGTCGGGTCTGCTTAACTACATGGACGGTTTGTGGTCAAGTGGTGGAGAGGAGCGGATTATAATCTTCACTACTAACCACAGAGAGAAAATTGACCCAGCATTGCTGCGCCCTGGTCGTATGGACATGCACATTCACTTGTCCTTCCTCAAAGGCAAGGCCTTTCGAGTCTTGGCTTCCAATTATTTGGCCATTGAAGGAGATCATCCTCTCTTTCAACAAATTGATGATCTGTTGGAGAAAATGGAAGTAACCCCAGCTGTGGTAGCAGAGCAACTGATGAGATATGAGGATCCTGACGTTTGTTTGGAATCGCTTATTAAATTTCTCAAACAAGAGGCCACCAAGGAAAGTCTACTTTTGGACCTTTAG 1386 0.4257 MGLYSHNSFSSFKSASSWFEVYAAFSTLMILLRTAINDLIPHQFRSFIASKLEAFFSKYQAKSNVFVKINQFWDESTGERNELFDAALEYLPTKISHTYKSLKVGRLPNRKHLELAVDGSEDVVDEFEGIKFTWKLDEGSNEESNNYRKHNFVLTFNEKQRERVLDRYIPHVLKTYEAMKDQRRIVKIYSRLDNYWNESELSHPSTFDSLALSPELKKDILDDLARFLGKKDLYKKVGKPWKRGYLLYGPPGTGKSSLIAAMANYLKFDVYDLELSSIYSNSDLMRSMKEASNRCIVVIEDIDCNKEVHTRSKPNYPSVNIDSDSDNEGPKMRSQGFTLSGLLNYMDGLWSSGGEERIIIFTTNHREKIDPALLRPGRMDMHIHLSFLKGKAFRVLASNYLAIEGDHPLFQQIDDLLEKMEVTPAVVAEQLMRYEDPDVCLESLIKFLKQEATKESLLLDL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00709 461 ProSitePatterns AAA-protein family signature. 357 375 IPR003960 GO:0005524|GO:0016887
Lapu2g00709 461 Pfam Domain associated at C-terminal with AAA 40 136 IPR025753 -
Lapu2g00709 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 442 IPR027417 -
Lapu2g00709 461 CDD RecA-like_BCS1 220 385 - -
Lapu2g00709 461 Gene3D - 384 454 - -
Lapu2g00709 461 PANTHER BCS1 AAA-TYPE ATPASE 23 452 - -
Lapu2g00709 461 Pfam ATPase family associated with various cellular activities (AAA) 246 385 IPR003959 GO:0005524|GO:0016887
Lapu2g00709 461 Gene3D - 197 383 IPR027417 -
Lapu2g00709 461 SMART AAA_5 241 389 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00709 Lapu-Chr2 6216323 6217828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00709 243 385 Calmodulin-binding Proteins AT3G56690 33.113 6.16e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00709 - K08900 gmx:100789094 711.064