Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00696 ATGGATCAGTCACCACCTTATTATAACCGATTTCTTCAGACTCCGAACTCAACTAAGAAGGGACGTAGTGGTTATGAGCCATCGGACACCGAGACCGAGTGGCAAGAGATTCCACGCCACGAACGAGAAAGAAGAAACTTCACTTTAAAAGAAACAAAAACACTTACTCTAATGAACAAAAGTCCCATGGCACTACATAGGAGGCACCCTTCCAGGGTTGAACATGAAGTTTCATCGGCTTCAACAACTTCAGTTCCACGTAGAAGACACAATAGCAAATCACCCTATAAGCTGCGCGTAGCGGAAGATGTTGCTGCTTCATCATCCCCCATAACAGGTTTAGATACACGTAGAAATATCAGTCCCTTGCCGAGACCTGACCTTGGAAGAACCGTGTCCCCTTTCAGGGAGCAAAGAACTGAGAAGCCACACTACAAGAGATCAGTGACTGCTCCGAGATTGAGGATTCAAGAGAGCAACCATGGAGGGAGAATCAATGACACTGTTCTAAAGCAAAGAGAAGTTTCTCCTTTCAAAGATCCTTCGGTTGGAAAAATCAACGAAATGATAGCAGAGGCGAAGCTATCTAAAGATCCCAGAAGTGATTATTCATCAGTGCTTGAAAGCACTGATTCCATTCAACCAGGTGACCTTTTCTTTTCTCGTGAATGCAATGCCTTGCAAGGGAGGAATTCTTCATTGCCAAAACGCATCCAACAGTGTGAGTATTTCAGTCCAAGGCCAACGGCGAACCCCACGAGAACCCCATCAGAAAGCAAAGGAAATAATAGTGATCTTAACATGAATATGAATATCTTGTCTCAATCAACCACGGGCTTGAGTTCTGCTGCCACGAGTAGAAAGGGCAGTGGCACTGGGAAGCCAAGTAGTGTAACAAGCGAAGGTAGTGGAAAGACAAGTGCAAGCATGAGGAAATTCACAGCCAACAGAAAAAAGAACCAGAAAGATACATGGTTTGCTTGCATGAGAACAGGTAACTGTAGAACCACTAGAAAATCGCCCGAACGTCGACCTGTTGACGAATCTTCTTACATTGAGAGAGCAGTGGTGGTGGAAAGCCTCCCACAATTCTTGGCAGATAAACACCAACCTGCTTCACTTAATGGCTTCATTTACAACAGACAAGAAGCTCAACGTCTCAAGGAATTGGTGTCCCATGGCACTTGCCCTCATATTTTGCTCAAAGGACCCTCTGGATCCGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATCTATGGTGATGCATGTTGTAATCTGTCTCATGATTTAAGACACTTCCCTATTCAGGACCAAAGGCTTAAGAAAGTATCTGTCCCCATAACATCCAGTCCTCATCATATGGAGCTAGATGTCAATTCAGAACCAAATGCTAAATATGCTTTAATGGGATTGATCAAAGAAATTAGCAATATATATGCGATTGCCCCTGAAGTCAGCAATATTAATTTCAAGTCAGATTTTAAAGTAATAGTTCTTTATGAGGTCCACAAAGCAGTGGATAACATCCAGCACATTATCAAATGGATCGTAGACCGCTATTCTGATATATGCAAATTAGTACTCTGTTGTGAAGATGATGCAGACATCATTGAACCTGTGAAAAACCGGTTGAAAACTATCCAACTTGATGCTCCTCAAACTCACGAAGTTGTTGAGGTTCTTATGCAGATAGCAAAGAATGAGAATTTTGATCTGTCCATGGACTTTGCTGCGAAGATTGCTACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTTGAAGCATGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCAATTCCAGTTCTATGGGAGGAGATCGTAATAGAAGTTGCCACAGAGATCCTAGCAGATCCATCATTTTCACGTTTACTCTCAATTCGAGCGAAGTTGCAAATGCTTCTCTTGGATTTTGTCCAGCCGAAATTGATTCTCCAGAAACTTGTAGAACATTTCCTAAAAAGAATTGAGGCCGGCTTAAAAAGGGAGCTATACTACTGGCACGCTTATTATGACAGAAGACTCCCACCAGGAATAACAGCTTTACTAAAGTTAGAAGGTAAGACATAA 2109 0.4239 MDQSPPYYNRFLQTPNSTKKGRSGYEPSDTETEWQEIPRHERERRNFTLKETKTLTLMNKSPMALHRRHPSRVEHEVSSASTTSVPRRRHNSKSPYKLRVAEDVAASSSPITGLDTRRNISPLPRPDLGRTVSPFREQRTEKPHYKRSVTAPRLRIQESNHGGRINDTVLKQREVSPFKDPSVGKINEMIAEAKLSKDPRSDYSSVLESTDSIQPGDLFFSRECNALQGRNSSLPKRIQQCEYFSPRPTANPTRTPSESKGNNSDLNMNMNILSQSTTGLSSAATSRKGSGTGKPSSVTSEGSGKTSASMRKFTANRKKNQKDTWFACMRTGNCRTTRKSPERRPVDESSYIERAVVVESLPQFLADKHQPASLNGFIYNRQEAQRLKELVSHGTCPHILLKGPSGSGKRELAMALLREIYGDACCNLSHDLRHFPIQDQRLKKVSVPITSSPHHMELDVNSEPNAKYALMGLIKEISNIYAIAPEVSNINFKSDFKVIVLYEVHKAVDNIQHIIKWIVDRYSDICKLVLCCEDDADIIEPVKNRLKTIQLDAPQTHEVVEVLMQIAKNENFDLSMDFAAKIATKSKQNLRKAIMALEACKAHNYPFSEEQPIPVLWEEIVIEVATEILADPSFSRLLSIRAKLQMLLLDFVQPKLILQKLVEHFLKRIEAGLKRELYYWHAYYDRRLPPGITALLKLEGKT* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00696 702 MobiDBLite consensus disorder prediction 243 314 - -
Lapu2g00696 702 FunFam replication factor C subunit 3 555 613 - -
Lapu2g00696 702 Gene3D - 556 613 - -
Lapu2g00696 702 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 366 697 - -
Lapu2g00696 702 MobiDBLite consensus disorder prediction 64 94 - -
Lapu2g00696 702 MobiDBLite consensus disorder prediction 1 46 - -
Lapu2g00696 702 MobiDBLite consensus disorder prediction 132 146 - -
Lapu2g00696 702 MobiDBLite consensus disorder prediction 109 146 - -
Lapu2g00696 702 Gene3D - 617 702 - -
Lapu2g00696 702 MobiDBLite consensus disorder prediction 24 46 - -
Lapu2g00696 702 MobiDBLite consensus disorder prediction 243 318 - -
Lapu2g00696 702 FunFam Replication factor C subunit 3 363 554 - -
Lapu2g00696 702 MobiDBLite consensus disorder prediction 1 23 - -
Lapu2g00696 702 Gene3D - 363 554 IPR027417 -
Lapu2g00696 702 SUPERFAMILY post-AAA+ oligomerization domain-like 616 700 IPR008921 GO:0003677|GO:0006260
Lapu2g00696 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 609 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00696 Lapu-Chr2 6107983 6111899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00696 366 700 Core DNA Replication Machinery Family AT5G27740 37.168 5.13e-70 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00696 K10756 - gmx:100795321 1234.94