Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00681 ATGAGAACGGATATTGGTGAAGGGGAGGCCTTACTAAATCCCCGCTCCTTTAAGGTGCATAGTAAAATCTGCATAGAACTCGCAAAATTTGTGGATAGAATCTCAGGAATAGTTCCAGATATAGAGGCAGCACGGCCAGGATTCTCATCAGGAATAGAGTCTCTGTGTCTGTTGAACAACGCAATTGAAAAAGCCAAACTACTTCTGCAGCATTGCTCTGAATGCAGCAAACTCTACCTGATTGTAACAGGGGATACAGTAGTCTCAAGATGCCTAAAGGCAACAAGATCATTAGAGAAAAGCTTAATCCAAATTCAGAATATGGTTCCTGTTATGTTGGCTGTGAAGGTTTCTAGAATAATTCATGATCTTGAGTGTACGAGATTTGTTCTGGACCCTGATGAAGAAGAGGCTGGTAGGATTGTGAGAGAGTTGCTCATTTCAACCTCAGATTCAGTCGACGATTCTGAAGTTAAAGCTCTTCAGTCTGCAGCATCTCGACTGAAAATAACATCCCAGAAGGCCATCGTAACAGAGCAACGATCTATTAAGAAGTTGTTAAATAAACTTGGACCACATGACCTGAAAAAGAAAAAGATACTGGGATATCTTCTGCATCTACTGAAAAAGCATGCAAAGATCATGGTGGAAGAACTTGAGGATAGGGTCTATTCTCCCGAAGAACCTGTTGCAACAGAGAACTCTAGTCACGATTCTCTGCGAAGCCATCATGTGGAGTCAGACCAAAGCTTAAACTATGATCAGTATATAACTCACACCAGTGAGTTGGGTGGAGTTGCCCTCCCTGAGCAATATAAGTGCCCAATATCCTCAAGGTTGATGTATGATCCTGTTATCATTGAGTCAGGAGTAACATATGAAAGGATGTGGATAAAAAAGTGGTTTGATGAGGGTAACGACACATGCCCCAAAACCAGAAAGAAACTAGTCCATATGGCTTTAACTCCAAACGTGGCCATGAAGGACGTAATATCAAAGTGGTGCAGAAAATATGGTGTCTCCATTCTAGATCCCAGTGGGCATGCAGAAGATATCCGATCATGGGAAGCTTCAAGCACTTCCATTAATAGTATAGGAAGTTATTTCAATGATTTCAACTCGCCAGTGGATCTTAGTAACATGTCAATTGGGTCACTGGATACTAGTTTTAGTTCAGATGCCTCGCATGGTAAGACCACTCGTGGCTCTATGTTGATCAGGACCAGTGACAATTCTGAAAAACATCAAGTTCATACAGAGATGCATGATACTGATTTGATGCTCTTGCCTCAACTCCGTGATCTTCAATGGGATTCTCAATGCAAGGTCATTCAAGACCTGAATGATCACTTGAAAAGCAATAGCCAAGCTTTTGTTTCTGTATCAGCAGAGAATTTGGTTGAACCGCTTCTCAGATTTCTGAGCAGTGCATATGATCTGCGTGATGTTCGAGCGTTGAGAGCTGGAACTCAGCTTCTCTTGGAGTTTGTGAACAATTGCAGAAATGGTAATACTGTTTTGAACGACGATACGTTCGTTATGTTGGCAAGTTTTCTTGATTCAGAAGCGAAAGAAGAAATTCTTGATATAATGGAAGAACTGTCAGGATTTGGGTTTAGTAAACCTAAAATTGCAGCATCCAGTGCTCTCAGTTCTATTTTAAACATACTTGATTCTGAAAACAAAGGTTTCCAACAACAGGCTATTAGAATAATGTACAATTTGTCTTTCATTGGTGAAGTCTGTTCCCGCATGCTATCTCTCAAGTGCATCCCCAAATTGCTGCCCTTTTTCAAAGACAGAACACTTTTGAGATACTGCATTTGTATATTGAAAAATCTTTGTGATACTGAGGAGGGCAGGAATTCTGTTGCAGAAACAAAGGGATGCATAACTTCTGTTGCTGAAATACTTAGTACAGGCAATAATGAAGAACAAGAATATGCACTGGCAGTTCTAGTCTCTTTATGCTCTCATGTGGATTATTGTAAGTTGGTAATAAGTGAGCATGAGGATATCATAACTCCTCTTTTTTGGATCTCTCAGAATGGAAACAATAAAGGAAAGAAAAGTGCGTTGGAATTGATCCATCTTTTGAATGATGTCGACATTGTTGACAATAAAGGATGCCCTGAACCAAATATCAGCAACTCTTGTGGAGATTCCAACAGTCACCCACCTGAAGAAAATAAACCATCAAAGAGACCCACGTTTTTGAAGAAACTATCACCATTCTCAAAGTCCAGTTCACATGCATCAAAAACCAAAAGATGA 2274 0.4024 MRTDIGEGEALLNPRSFKVHSKICIELAKFVDRISGIVPDIEAARPGFSSGIESLCLLNNAIEKAKLLLQHCSECSKLYLIVTGDTVVSRCLKATRSLEKSLIQIQNMVPVMLAVKVSRIIHDLECTRFVLDPDEEEAGRIVRELLISTSDSVDDSEVKALQSAASRLKITSQKAIVTEQRSIKKLLNKLGPHDLKKKKILGYLLHLLKKHAKIMVEELEDRVYSPEEPVATENSSHDSLRSHHVESDQSLNYDQYITHTSELGGVALPEQYKCPISSRLMYDPVIIESGVTYERMWIKKWFDEGNDTCPKTRKKLVHMALTPNVAMKDVISKWCRKYGVSILDPSGHAEDIRSWEASSTSINSIGSYFNDFNSPVDLSNMSIGSLDTSFSSDASHGKTTRGSMLIRTSDNSEKHQVHTEMHDTDLMLLPQLRDLQWDSQCKVIQDLNDHLKSNSQAFVSVSAENLVEPLLRFLSSAYDLRDVRALRAGTQLLLEFVNNCRNGNTVLNDDTFVMLASFLDSEAKEEILDIMEELSGFGFSKPKIAASSALSSILNILDSENKGFQQQAIRIMYNLSFIGEVCSRMLSLKCIPKLLPFFKDRTLLRYCICILKNLCDTEEGRNSVAETKGCITSVAEILSTGNNEEQEYALAVLVSLCSHVDYCKLVISEHEDIITPLFWISQNGNNKGKKSALELIHLLNDVDIVDNKGCPEPNISNSCGDSNSHPPEENKPSKRPTFLKKLSPFSKSSSHASKTKR* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00681 757 CDD RING-Ubox_PUB 269 318 IPR045210 -
Lapu2g00681 757 Gene3D - 431 705 IPR011989 -
Lapu2g00681 757 MobiDBLite consensus disorder prediction 715 757 - -
Lapu2g00681 757 PANTHER U BOX DOMAIN-CONTAINING 24 703 - -
Lapu2g00681 757 SMART Ubox_2 271 334 IPR003613 GO:0004842|GO:0016567
Lapu2g00681 757 SUPERFAMILY ARM repeat 428 699 IPR016024 -
Lapu2g00681 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 341 IPR013083 -
Lapu2g00681 757 ProSiteProfiles U-box domain profile. 267 341 IPR003613 GO:0004842|GO:0016567
Lapu2g00681 757 Pfam U-box domain 269 336 IPR003613 GO:0004842|GO:0016567
Lapu2g00681 757 SUPERFAMILY RING/U-box 260 344 - -
Lapu2g00681 757 Pfam Kinesin-associated protein (KAP) 484 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00681 Lapu-Chr2 6003731 6009740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00681 1 703 U-box Gene Family AT4G36550 38.429 1.51e-142 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00681 - - gmx:100775550 1180.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00681 2 6003731 6009740 Lapu2g00681 2 6003731 6009740 ECH