Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00666 ATGTCTGACTCGCATCTAATTTTCTACTCTCCTTCGTTCATTCTTTCTCTTCTCCCAATCTTCTTCCTCTTCATTCTTATCAAAAGAAAGCAAACCAAACCCAGGCTCAACCTTCCCCCAGGTAACATGGGCTGGCCATTCCTTGGTGAAACCATTGGCTATTTGAAGCCTTATTCTGCCACCACAATAGGGGAATTCATGGAGCAGCACATAGCAAGGTATGGTACAATTTACAAGTCCAAGCTATTTGGGGAGCCGGCAATAGTGTCAGCAGATGCAGGACTCAACAGGTTCATTCTACAGAACGAAGGGAAACTGTTCGAGTGCAGCTATCCCAGAAGCATTGGTGGAATACTCGGGAAATGGTCCATGTTGGTCTTAGTTGGCGACATGCATAGAGACATGCGGGTTATATCACTCAACTTTCTAAGCCACGCCAGACTCAGAACCCACCTCTTGAAAGAGGTGGAGAAACACACTCTCTTGGTTCTAAACTCTTGGAACCAAAATTGCACATTCTCAGCCCAAGATGAAGCCAAGAAGTTCACCTTCAATCTGATGGCTAAGCATATCATGAGCATGGATCCTGGGGAAATCGAGACAGAGCAACTAAAGAAAGAGTACGTCACTTTCATGAAAGGGGTGGTATCCGCGCCATTGAATCTACCTGGAACTGCATACCGAAGGGCGTTAAAGTCTAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTGAAGAGAATCCAAGAGGGAAACGAGAGTTTGGAGGAAGATGATCTTCTGAACTGGGTTTTGAAGCACTCGAATCTTTCGACGGAACAAATTCTGGACTTGATTCTCAGCTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCCATAGCACTAGCCATTTACTTTTTGCCCGGTTGTCCTCAAGCTATGCAACAGTTAAGGGAAGAGCACAGTGAAATTGCCAGAGCCAAGAAACAAGCAGGGGAAGTTGAACTCACTTGGGACGATTACAAGCGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTAAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTCTGAAAGATGTTAACTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCGTGGAGATGGCAGAACAATGGCAGTCGTGGAAGTTGTCCGACCAAGACCACACCAAACAATAACTTTCTGCCCTTCGGAGGAGGATCACGGCTATGCGCGGGGTCGGAGTTAGCCAAGCTTGAAATGGCGGTTTTCATTCATTATCTGGTCCTCAACTACCATTGGGAATTGGCTGAAACAGATCAAGCTTTTGCCTACCCTTTTGTGGACTTCCCAAAGGGCCTACCCATAAGAGTCCAACCCCACTCTTTGATTTGA 1473 0.4623 MSDSHLIFYSPSFILSLLPIFFLFILIKRKQTKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLNSWNQNCTFSAQDEAKKFTFNLMAKHIMSMDPGEIETEQLKKEYVTFMKGVVSAPLNLPGTAYRRALKSRSTILKFIEGKMEERVKRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPQAMQQLREEHSEIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVNYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGSCPTKTTPNNNFLPFGGGSRLCAGSELAKLEMAVFIHYLVLNYHWELAETDQAFAYPFVDFPKGLPIRVQPHSLI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00666 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Lapu2g00666 490 CDD CYP90-like 70 486 - -
Lapu2g00666 490 SUPERFAMILY Cytochrome P450 35 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 Coils Coil 242 262 - -
Lapu2g00666 490 PANTHER CYTOCHROME P450 26 34 465 - -
Lapu2g00666 490 Pfam Cytochrome P450 39 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 Gene3D Cytochrome P450 27 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00666 490 FunFam Cytochrome P450 90B1 28 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00666 Lapu-Chr2 5863275 5868337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00666 28 409 Cytochrome P450 AT3G50660 76.923 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00666 K09587 - gmx:100789515 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00666 2 5863275 5868337 Lapu2g00666 2 5863275 5868337 ECH
Lapu2g00666 2 5863275 5868337 Lapu3g01642 3 21324576 21328788 PCT