Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00660 ATGCTGTCTTTGAGAATTGACAAGCCTTTATGTAAATTCAATGGGTTTCCTGAAGCTACACTAGAGGAGGATCAAATCAATAATGTTGAAATATCATCAGCAGAAAGTATTAGTATTCCACACAAGGAAAAATTACCACCATATATGGCTTGGGTATATGTGGCCAGAAATGAGAAAATGGTTGAAGATCAATCGGTTATTGGAAAATACCAAATGTACTATGATCAAAATAGAGGTGAAATGATGATATGCAGTGATAATGAGGAAGAGATACCAAATACCAAGGATGTTAAACATGAATTCACTGACGCTGAAGACCAAATTCTGAGGATGACACTCGATGAATATGGGTCTACTAAGGAGGTATTGGGTATCATTAAAGAGATTCTTGAGACTAACGAGTCACAAATTCAGGAGAGGTACGAAAAACTAAAGGAAAAGAATATGGAGAGTCTGGATCAATATTCTAAAGATTGTCATTGTAAAGGATGTGAAAATCATCTTGGAATATGTTTGGAAAAAAGTTTGAGTGGTTCTTCAGAAACTTTTCATAAACTCTTCTGTCGCCGATGTTTGAGCTTAGACTGTGCCATCCATGGCACTGATCAACCCTTAATAGATCTTAGCGAAAAAGATGTCTGCTCTGAACCTGAAGGTGGTAGAAAACCATGCAGTGATCAATGTTACCTTCTGGATAAAAGAATTACACCAGCGGAAGAGGACTCAACATTTCCTCTTAATGAGCCTCAGAGTTCTTGTAAGCTGAAGAGAATCTCAGATGATATGATTATCGAAATGGGCAATCATTACAGTGAACTAAATCTGGATGCTAGTGACAAAGAAAACCACACAACATATCGCGCATCTTTGGAAAGTCTAGAGGAGTATGCTTCAAAGAAATTATCAGTTTCTGGAAGCTTTGACCATAGTGAGCGGGACGAAGGTGTTACGAATGGACAAAAAGATCTTACGAAGGAGATAGAATTTAATGACATGTCCATTTCAAAGGAAGTGCAAGCTGATGAGATGATAAGTGACTTAGAGTGGAGACCTCTAGAGAGAGACCTATATTCCAAGGGAGTAGAAATGTTTGGCAAGAATAGTTGCCTTATAGCAGCTACCTTACTTCCTGGTTTGAAGACTTGCTTGCAAGTAGCTAGGTATATGTTTGCTGATGGAGAGTCAATGATCCACGGATCCACACAAAATTCAATCATGGATAGAAATGAAAACAACAATGCAGAATGCACAGACCTAGAAATGTCATCAAGAACAAGGTCACAGCGGAAAAAGGCAAAACCTAGAAAGTTCAACTATACTCGAAAGTCTGCTGGTCTCCCCCCAAGATGGAGAAAAATTGCTTATGGGCAAAATCTGTGTAATAAGCAATATACTCCTTGTGGGTGTCATGGAATGTGTGGAAAGGAATGCTCTTGTCTTCTCAATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGCTATGCAAAAATCGATTCAGAGGATGTCACTGTACCAAGAGTCAATGCAGAAGTCGATTATGTCCGTGCTTTGCAGCCAATCGCGAGTGTGACCCAGATGTCTGTCGAAATTGTTGGGTTAGTTGTGGCGATGGTTCCTTAGGGGAGCCACCTCGACGTGGAGATGGTAAATGCGGAAATATGAATATTCTTTTAGGACAAAAACAGAGGATTCTTTTGGCCAAGTCAGATGTTACAGGATGGGGAGCCTTCGCAAAGAACTCAATTAACAAAAATGTTTGCCTTGGAGAGTACAAAGGTGAACTAATCCCTCCTAAAGAAGCAGAAAAACGTGGGAAACTGTATGATCGTATCAACACTTCCTTCCTTTTTAACCTCAATAATCAGTGGGTTATCGATGCCCAACGCCTAGGAGACAAATTAAAATTTGCGAACCATTCATCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGATCACCGAGTGGGAATATTTGCCAAGGAAAACATTGAAGCTGGTGATGAGATTTTTTATGACTATTGGTATGATCTAGACTGTGCACCATCATGGGCTCTTCCACCGGAAGACAATGCTTCCAAAAAAGATGAATTAGGCACTTCTCAAAGCAAGGCCAAGAAACGTTAG 2136 0.3984 MLSLRIDKPLCKFNGFPEATLEEDQINNVEISSAESISIPHKEKLPPYMAWVYVARNEKMVEDQSVIGKYQMYYDQNRGEMMICSDNEEEIPNTKDVKHEFTDAEDQILRMTLDEYGSTKEVLGIIKEILETNESQIQERYEKLKEKNMESLDQYSKDCHCKGCENHLGICLEKSLSGSSETFHKLFCRRCLSLDCAIHGTDQPLIDLSEKDVCSEPEGGRKPCSDQCYLLDKRITPAEEDSTFPLNEPQSSCKLKRISDDMIIEMGNHYSELNLDASDKENHTTYRASLESLEEYASKKLSVSGSFDHSERDEGVTNGQKDLTKEIEFNDMSISKEVQADEMISDLEWRPLERDLYSKGVEMFGKNSCLIAATLLPGLKTCLQVARYMFADGESMIHGSTQNSIMDRNENNNAECTDLEMSSRTRSQRKKAKPRKFNYTRKSAGLPPRWRKIAYGQNLCNKQYTPCGCHGMCGKECSCLLNGTCCEKYCGCSKLCKNRFRGCHCTKSQCRSRLCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRRGDGKCGNMNILLGQKQRILLAKSDVTGWGAFAKNSINKNVCLGEYKGELIPPKEAEKRGKLYDRINTSFLFNLNNQWVIDAQRLGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFAKENIEAGDEIFYDYWYDLDCAPSWALPPEDNASKKDELGTSQSKAKKR* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00660 711 FunFam Putative histone-lysine N-methyltransferase EZH2 464 680 - -
Lapu2g00660 711 CDD SET_EZH 563 679 - -
Lapu2g00660 711 ProSiteProfiles SET domain profile. 563 678 IPR001214 GO:0005515
Lapu2g00660 711 SMART CXC_2 498 535 IPR033467 -
Lapu2g00660 711 MobiDBLite consensus disorder prediction 693 711 - -
Lapu2g00660 711 SUPERFAMILY SET domain 433 681 IPR046341 -
Lapu2g00660 711 Coils Coil 127 154 - -
Lapu2g00660 711 Gene3D SET domain 464 679 IPR046341 -
Lapu2g00660 711 Pfam CXC domain 502 533 IPR041355 -
Lapu2g00660 711 MobiDBLite consensus disorder prediction 689 711 - -
Lapu2g00660 711 ProSiteProfiles CXC domain profile. 450 549 IPR026489 -
Lapu2g00660 711 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 711 IPR025778 GO:0031519
Lapu2g00660 711 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 11 700 IPR045318 GO:0006338|GO:0042054
Lapu2g00660 711 SMART set_7 563 686 IPR001214 GO:0005515
Lapu2g00660 711 Pfam SET domain 574 677 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00660 Lapu-Chr2 5796210 5803248 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00660 552 677 C2H2 Transcription Factor Family AT2G23740 27.972 7.48e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu2g00660 SET 2.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00660 - K11430 vra:106776653 1274.61