Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00646 ATGCACACAAGCAAAGATAAAAGGCCCAAAGTGATAACAACCAAAAGCCCCCTTCTCCTTCCCACACTCCACTTTCAAGCTTCAACGATTCCTCTTCTCCAGCACTCACATCACAAAGCACAAGGTCACACCACAGCACCTTTCGTTAGTCCTCAACGAGCGATGAGAGTTCCCGTTCCCTCATCCCCACAGGCTAACCCAAAACCAACTAATAACCTACTCCGTACCATTGCCCTTCCCAACCTCAACACCACGGGCCTGTGCTACGAGCCCACCTCTGTACTCGACCTGTGCCGCAGCCCCAGCCCGGGCGCCGAAAAGCCCACTGATCACGCAGTTGTCGTCACCAACTCCCAAGATATTCTCGACCTGGACGACCATGCGTTGCACAACTTGGATTGGGACTCCATCATGAAGGACTTGGGTTTACACGACGACTCGGGTGCTCCCCTTCTGAAGACTATTGCCCACCCCGACAACAACAATAACAACCCATGCGACGATTTCACAATCGCACCCTTCGACCACGCGCTGGAATTCTCCACTCTCTCCGACATCTACTCCAACCAAAACCTCGCCTTCGATTTTAACCACCTCGTTCACGACTTCAGCCACCACCACCACAACAACGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCCGATTGCTTCGACACCAAGCAGTTACACCTGGCGCAAGTGATATTGGAGCGGCTCAATCAACGGCTACGGTCCCCCGTGGGAAAACCTCTCCAACGCGCAGCGTTTTACTTCAAAGAAGCTCTCCAGTCTCTTCTCTCCGGTTCGAACCGGACGCCCAGGATTTCCTCCCTGGTGGAAATCGTGCATGGCATCAGAACTTTCAAGGCCTTCTCCGGAATCTCACCGATCCCAATGTTCTCGATCTTCACCACCAACCAAGTGGTTCTCGATCACGCTGCGTCCTCCTTCATGCACGTCATCGACTTCGACATCGGCCTCGGGATTCAATACGCTTCTCTCATGAAGGAGATAGCGGAGAAGGCCACGGACTCGCCGCTTCTCCGAATCACCGCCGTCGTTCCCGAAGAGTACGCCGTCGAGAGCACGCTGGTCCGCGACAACTTGGCGCAGTTCGCTAACGAACTCAGGATCCGCGTCCAGGTCGACTTCGTTCCGCTCCGAACCTTCGAGACGATCTCTTTCAAGGCTGTGAAACTCGTCGACGGCGAGAGCACTACCATCCTCCTTTCGCCAGCGATTTTCCGCCACGTCGGAAATGCTGCCGGGTTCTTGGCGGACTTGAGGAGGGTCTCTCCCAGCGTGGTGGTTTTGGTGGATGGCGAGGGGTGGGCGGAGATGGCCACAGCGGCGTCCTCGTCGTTCCGACGCGGCGTTGTGAGCGGTTTGGAGTACTACTCGATGATGCTGGAGTCGCTGGATGCGTCCACGGCTGGGGGAGGGGGTGAGTGGGTGAGGAGAATCGAGATGATGCAGCTGCGGCCAAAGATTTTTGCGGCGGTAGAGAGTTCATGGAGGCGAATACCACCGTGGAGGGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTCCAGTTGAGCCAATTCGTGGATTTCCAAGCAGAGTGCTTGTTGGCGAAGTCTCAAATCAGAGGGTTCCACGTGGAGAAACGTCAGAACGAACTGGTACTGTTTTGGCATGACCGAGCCATGGTTTCGTCGTCAGCTTGGCGCTTTTAG 1719 0.5579 MHTSKDKRPKVITTKSPLLLPTLHFQASTIPLLQHSHHKAQGHTTAPFVSPQRAMRVPVPSSPQANPKPTNNLLRTIALPNLNTTGLCYEPTSVLDLCRSPSPGAEKPTDHAVVVTNSQDILDLDDHALHNLDWDSIMKDLGLHDDSGAPLLKTIAHPDNNNNNPCDDFTIAPFDHALEFSTLSDIYSNQNLAFDFNHLVHDFSHHHHNNGFDFIEELIRAADCFDTKQLHLAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRISSLVEIVHGIRTFKAFSGISPIPMFSIFTTNQVVLDHAASSFMHVIDFDIGLGIQYASLMKEIAEKATDSPLLRITAVVPEEYAVESTLVRDNLAQFANELRIRVQVDFVPLRTFETISFKAVKLVDGESTTILLSPAIFRHVGNAAGFLADLRRVSPSVVVLVDGEGWAEMATAASSSFRRGVVSGLEYYSMMLESLDASTAGGGGEWVRRIEMMQLRPKIFAAVESSWRRIPPWREAFYGAGMRPVQLSQFVDFQAECLLAKSQIRGFHVEKRQNELVLFWHDRAMVSSSAWRF* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00646 572 ProSiteProfiles GRAS family profile. 205 571 IPR005202 -
Lapu2g00646 572 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 198 565 IPR005202 -
Lapu2g00646 572 Pfam GRAS domain family 215 571 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00646 Lapu-Chr2 5670367 5672541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00646 122 572 GRAS Transcription Factor Family AT4G36710 55.063 3.19e-167 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu2g00646 GRAS 4.9e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00646 - - gmx:100807470 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00646 2 5670367 5672541 Lapu2g00646 2 5670367 5672541 ECH
Lapu2g00646 2 5670367 5672541 Lapu3g01634 3 21110306 21112520 PCT