Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00629 ATGCATCTCTTTCCCTTCACTCCCATAATCCTTTTCACCGTTTTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCATGTCCTCAAAGAGGTAACAAAAACTCTATTCGTGGTTACACTTGTAATGGTGCAAACAGCTGCCAAACATACCTTACTTTCAGATCTCAACCCATTTACAACTCTGTCTCCACAATATCTACTTTATTGGGTTCTGACCCCTCCCAACTTGCTAAAATAAATTCCGTTTCCCTCAATGGCACCTTCGAAACAAACAAGTTGGTGCTTGTTCCGGTCAACTGTTCCTGTGCAGGTGAGTATTATCAAACAAACACATCCTATGTGTTCCAGAATTCAGAAACTTACTTCTTGATTGCTAACAACACTTTCGAGGGCCTCACAACATGCCAAGCTTTGCAGAATCAAAACCACAACCCAGCAAACATATACCCCGGTAGAAAACTTCTGGTGCCTCTCAGATGTGCTTGTCCCACAAAAAACCAAACCGAGAAAGGCATCAGGTACCTCTTAAGCTACTTGGTGAAGTGGGGTGATTCTGTTTCAGTCGTCGGTGATAAATTTGGTGTTAAAACTACGACCACTCTTGAAGCTAATAACCTCACTTTGACACAATCCATGATCTATCCCTTTACTACACTTCTAATTCCTCTTCATGATAAGCCCTCAAGTTCTCAAACCGTTTCTCCAACTCAACATACTCCACCACCCTCATCACCCCCCTCTTCTCATCAAAACAAAACATGGGTGTATGTTGTTGTTGGAGTTGTCGTAGGAGCTGTTGCCTTAACATCAGCTCTCTGTGCTGTCATTTTCTTCACACGCTATCGCAAAAATAAAAACAAAGATGATTCAATGATAGTGTCTAAGAGTTTTGAGGCAACTAAGAAAAAACCACAAAGGAGAGTAAATGAAAAATTGTCAGAGATCATATCTGGCATAGCTCAATCGTTCAAGGTGTATAATTTTGAGGAACTACAGCGAGCAACAGATAACTTTAGTCCTAGCTATTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAATGGTGATTTGGCCGCAATTAAAAAGATTGAAGGTGATGTGACAAAGGAGATGGAGATACTGAACAGAATAAACCATTCCAATGTTATACGCCTTTCTGGGGTTAGCTTCCACGAGGGGCGTTGGTACCTTGTTTATGAGTATGCTGCAAATGGAGCTTTGAGTGAATGGATCTACTTCAACAACGTGGATGGGAAGTTTCTGAGTTGGACGCAGAGAATACAGATTGCATTGGATGTGGCCACAGGACTTGATTATCTTCACAGTTCTACTTCTCCTCCTCATATCCACAAGGATATTAAGAGTAGTAACATTCTTCTGGATGGTGATTTCCGGGGAAAGGTTGCAAATTTAAGCCTAGCTAGGCGTGTGGAAGGAGGGGATGACCAATTTCCTGCCACTAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCCGAGTATTTGGAACATGGTCTTGTGTCTACAAAGCTTGATGTGTATGCTTTTGGGGTAGTGATGCTGGAAATGGTCACAGGAAGAGAGGTTGCGGCTATTGTAACAGAAGACGAGACAAACTTGTCGCATGTTTTACGTGACATGCTTGGTGAGGAAAGAGGCCAGGAGAGGTTGAAGGAGTTCGTGGATCCTTCTTTGCGAGAAAATTGCCCATTTGAACTAGCTATGTTTGTGATTGAAATGATTGATAATTGCATATTGAATGATCCAGCAAGTCGTCCTAGTGTGCATGAGATTGTGAAATCTCTGTCAATAACCCTGAACTCTTCACTGAGTTGGGAAAGGTCAATGAATGTCCCACGAAACTAG 1893 0.4247 MHLFPFTPIILFTVLIHNFSLILGQQPYIGLGTVACPQRGNKNSIRGYTCNGANSCQTYLTFRSQPIYNSVSTISTLLGSDPSQLAKINSVSLNGTFETNKLVLVPVNCSCAGEYYQTNTSYVFQNSETYFLIANNTFEGLTTCQALQNQNHNPANIYPGRKLLVPLRCACPTKNQTEKGIRYLLSYLVKWGDSVSVVGDKFGVKTTTTLEANNLTLTQSMIYPFTTLLIPLHDKPSSSQTVSPTQHTPPPSSPPSSHQNKTWVYVVVGVVVGAVALTSALCAVIFFTRYRKNKNKDDSMIVSKSFEATKKKPQRRVNEKLSEIISGIAQSFKVYNFEELQRATDNFSPSYWIKGSVYRGVINGDLAAIKKIEGDVTKEMEILNRINHSNVIRLSGVSFHEGRWYLVYEYAANGALSEWIYFNNVDGKFLSWTQRIQIALDVATGLDYLHSSTSPPHIHKDIKSSNILLDGDFRGKVANLSLARRVEGGDDQFPATRHIVGTRGYMAPEYLEHGLVSTKLDVYAFGVVMLEMVTGREVAAIVTEDETNLSHVLRDMLGEERGQERLKEFVDPSLRENCPFELAMFVIEMIDNCILNDPASRPSVHEIVKSLSITLNSSLSWERSMNVPRN* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00629 630 MobiDBLite consensus disorder prediction 236 259 - -
Lapu2g00629 630 FunFam PTI1-like tyrosine-protein kinase 3 411 625 - -
Lapu2g00629 630 Pfam Protein kinase domain 357 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00629 630 SUPERFAMILY Protein kinase-like (PK-like) 330 611 IPR011009 -
Lapu2g00629 630 ProSiteProfiles LysM domain profile. 120 165 IPR018392 -
Lapu2g00629 630 SMART serkin_6 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00629 630 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 623 - -
Lapu2g00629 630 Gene3D Phosphorylase Kinase; domain 1 317 410 - -
Lapu2g00629 630 Gene3D LysM domain 185 243 IPR036779 -
Lapu2g00629 630 SMART LysM_2 121 166 IPR018392 -
Lapu2g00629 630 SMART LysM_2 186 231 IPR018392 -
Lapu2g00629 630 ProSiteProfiles Protein kinase domain profile. 295 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00629 630 Pfam LysM domain 122 166 IPR018392 -
Lapu2g00629 630 Pfam LysM domain 187 231 IPR018392 -
Lapu2g00629 630 Gene3D Transferase(Phosphotransferase) domain 1 411 621 - -
Lapu2g00629 630 ProSiteProfiles LysM domain profile. 185 230 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00629 Lapu-Chr2 5506373 5508265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00629 3 624 Receptor kinase-like Gene Family AT2G23770 41.956 1.05e-167 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lapu2g00629 Pkinase 8.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00629 - - gmx:100779907 1064.29