Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00623 ATGACAGAAATGATGCGAAGTCCAAGAGTGATGAAGAAAGCACAAGATGAGTTAAGACAAGCTTTAGGAGATAAGGAAATAATTCATGAAAGGGATATAGAGCAACTTAGTTATTTGAAGTTGGTGGTCAAAGAGACATTGAGGCTACACCCACCTACTCCTTTGTTGATCCCTAGAGAATGCTCTGAACAAACCATCATCGATGGATATGAAATACCTGTCAAAACTAAAGTGATGATAAACGTATGGGCAATTTGTAGGGATCCCCAGTACTGGACTGATGCAGAGAAGTTTGTCCCAGAAAGGTTTGAGGGAAGTTCTATCGATTTCAAAGGAAACAACTTTGAGTATCTGCCATTTGGAGCAGGAAGGAGAATATGCCCAGGGATCTCGTTTGGTTTAGCAAGTATCATGCTTCCACTGGCTCGATTACTTTATCATTTCAACTGGGAACTCCCAGATGGCATGACAACTGAGAGTATAGACACGATTGAACGCTTCGGAATGGCCATTGGGAGGAAAAATGATTTGTGTTTGATCCCCATTGTTTATGATCCTTGA 561 0.4118 MTEMMRSPRVMKKAQDELRQALGDKEIIHERDIEQLSYLKLVVKETLRLHPPTPLLIPRECSEQTIIDGYEIPVKTKVMINVWAICRDPQYWTDAEKFVPERFEGSSIDFKGNNFEYLPFGAGRRICPGISFGLASIMLPLARLLYHFNWELPDGMTTESIDTIERFGMAIGRKNDLCLIPIVYDP* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00623 186 Coils Coil 11 31 - -
Lapu2g00623 186 FunFam Predicted protein 1 179 - -
Lapu2g00623 186 Pfam Cytochrome P450 2 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 120 129 IPR017972 GO:0005506|GO:0016705
Lapu2g00623 186 Gene3D Cytochrome P450 1 174 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PANTHER OS08G0105600 PROTEIN 1 185 - -
Lapu2g00623 186 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PRINTS P450 superfamily signature 127 138 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu2g00623 186 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00623 Lapu-Chr2 5452897 5453457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00623 1 184 Cytochrome P450 AT3G26330 54.891 2.08e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00623 - K15472 gmx:100777769 333.954