Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00619 ATGGAAGTTCTTCCTTGTTCTGGTGTTCAATATGCTGGGGAATCTGACTGCACGCAGCAGAGTTCAGGAGCTGGTTTTGTATATCAGGAAGAACCTAATTGTGCTGAAAATGGTGAGAAAGTCAAACTGGTAGCTGCTCAACTGAATGAATCATCCCATAAAATGCAAGGGCCTCAGATAGAAAGGCAAGGTGGTTTGTCAACTTATTCAGATTGCCAATGCATTGGAGCTTCATGTTGTGACTGTCAAGTGGATGATCAAAATGAATATTGTGGTTTCCATGATTTTGAAGAAGACATTATGCATGAACCTTGCTTGACATCTGATAACTGTATCTCTGTTGTTGATACAATTGAAAGTGAATCACCAAACAACAGTCGGGAAGGAGACTTGTCATGTTCTGAACCCAAGTGGCTAGAAGGGGATGGATCAGTGGCATTGTGGGTCAAGTGGAGGGGGAAGTGGCAGGCTGGTATTCGGTGTGCAAGGGCTGACTGGCCGTTATCAACATTGAAAGCAAAACCAACGCATGAAAGGAAAAAATATTTTGTTATATTCTTTCCACACACTAGGATTTATTCTTGGGCGGACATGCTACTCGTTAGATCAATTAATGAGTTTCCCCATCCCATTGCATATAAGACTCATCAGGTGGGACTGAAAATGGTAAAAGACTTGAGTGTTGCACGGCGGTTTATAATGCGGAAGCTAGTTGTTGGCATGCTGAACATGGTTGATCAGTTTCCTTTTAATGCTTTGACAGAAACTGCACGTGATATGAAGATCTGGAAGGAGTTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGAAGAATGCTTCTAAAGCTGCATAATAGCATACTGCAGCATCATATAAATGCTGACTGGTTACGGCACTCTTATCCCTCTTGGAATGAAAGATGTCAAAGTGCAAATAGTGCTGATTCAGTGGAGCTACTGAAGGAGGAATTGTTTGATTCTATTTTGTGGAATGGGATCAATACTCTCTCTGATGCACCAGTGCAACCAGCATTAAGTTCTGAATGGAAAACCTGGAAGCATGATGTAATGAAATGGTTTTTGACACCACCTTCCTTTTCGATCAACAAAGACACCCAGCAACAGAATTCTGATGATTTGTACCGAGCAAACCTTCAGGTTTGTAGAAAAAGAGCCAAACTTGAAGTTCGTCGGGCAGATACACATGCTTCACAAGTGGAAATCAAGGCCCAAACTGTTGCTCTTCAGGCTGACCCTGGCTTCTTTAAGAATCAGGGAACATTGAGCACATTAGCAGCCGAATCTTGCAAACAGGAAGGTGTTAGGGAGGTGTCTATGGCAATTGATTCCCCTGGTCATTTGGTCGATAAATGGAATGAAATTGTAGTTGAGCATACTGATGCTGATTTTTTGCATACCAAAGAAAGGGAATCAACACCAACAAATGAAATGACTGTTGCAAAATCCGTAGAATCTGGTAGTAAGAATCGACAATGTATAGCATATATTGAAGCAAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTGTACTGTTGTGTACATTTATCCTCCCGATTTTTGGGCAGCTCAACAAAATCTGAAAAGCCTGTTCCACTTGATACTCCTATGTGTGAAGGCACTACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTTCCTGGCTCTTTATTCTGTAAGAAACACCGGCCACATGCTGAAACAGAGCAGATCTCAAATATACCGCAGAATACACTAAAGAGGAAACATGAAGAAAATTATACTGGTTCAGAGGGCATTTTCTCCAGAGACTTGGTACTGGTAAATGTTGGAAGTCCACAGCAATTGGATCCAGTGCCATCCATTGGTGGTGATTCCCTGCATGGAGAGAACAACTTTAACGAGAAGCCCATGCATTCTGAAAATGATCACAATCCAATGGAGTCACTGCACTGTATAGGTTCCCCTCCTTATGATAAGAAGAATCCTTGTAAGGAAGGTCCTAAACGGTATTTCTTGTACTGCGAAAGTCACCTCCCCAGCTGGCTTAAGCGTGCTAGAAATGGGAAGAGTAGAATATTATCAAAAGAAGTGTTCACAGAACTTTTGAGGGACTGCAGCTCATGGGAGCAAAAGATACATCTGCATAAAGCATGTGAACTTTTTTACAGACTTCTTAAAAGCATTTTGTCATTAAGAAACCCTGTTCCTAAGGATGTCCAATTTCAGTGGGCTCTGACTGAAGCCTCTAAAGATTCTAGTGTAGGAGAGTTTTTTAAAAAGTTAGTTCACAGTGAAAAGGCCAGAATGAAGTCAATATGGGGATTCAATGATGACATGGATATATCCTCTGTCATGGAAGAACCACCTCTCTTGCCATCCACAAACAATGATCTCTATGATAAGGAAAATGCCATTAAGTGTAAGCTTTGCTCTACAGAATTTCTTGATGACCAAGAACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAGGCACAGTGGCTGTTTAGAGGCTATGCATGCGCCATTTGTCTGGATTCATTTACTAACAAGAAACTGTTGGAAACGCATGTTCAGGAGAGACACCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAGTGCATCCCTTGTGGGAGTCATTTTGGAAATACTGAACAATTATGGCAGCATGTTTTATCAGTTCACCCTGTTGATTTTAAACCGTCAAAAGCTCCTGAGCAGCAAACTTTCTCTACTGGGGAAGAGTCTCCAGTAAAACGTGATCAGGGTAATTCAACTCCTTTGGAGAATAATTCTGAGAATACAGGTGCTTTTCGGAAATTTGTTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCTAATCTGGCCAGCAGTCGCCCTGCAAAGAGGGGAGTTCGCTATTATGCATACAGATTAAAATCTGGCAGACTTAGCCGCCCCAGATTTAAAAAAAGTTTGGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATAATTTAAAGCGGCATATTCAGGAAACAAACTCACTGGGCACAGGAGGAATAACCATACAACCTCAAGTTACAGAAACAACAAACATTGGTAGATTGGCTGAACATCAATGCTCAGCTGTTTCGAAGATTTTGTTTTCAGAGATTCAGAAGACAAAGCCTCGGCCTAACAATCTTGATATTTTATCAATTGCTCGCTCTGCGTGCTGCAAAGTTAGTCTTGTAGCATCACTGGAGGAGATATATGGAATTCTTCCTGAAAAGCTCTATTTGAAGGCAGCAAAACTTTGCAGTGAGCATAATATTTTGATAAGTTGGCACCAGGAGGGGTTTATTTGTCCTAGAGGTTGTAATGTATCAAAGGGTCAAGCTTTGCTCTCTCCTTTAAAGTCTCTTCCTAATAGTTCTGTAATGCCCAAAGCTGTGAATTTATGTGATCCCACAACTGATGATTGGGAGGTGGATGAATTTCACTGCATCATCAATTCACAAACTTTAAAGTTAGGTTCACTGCAAAAAGCTGTGGTCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAATTCCAGTGATTTGTGTAGTAGATCAAGAACTTGCGCATTCTCTTCATATCAATGGCTGTAATGGACAAAATATAAACCCTTCAAGGCCTTGGGAGACCTTTACCTATGTTACAAAGCCAATGCTTGATCAATCCCTCATTCTTGATTCAGAGAGTCTGCAACTGGGATGTGCCTGCTCATACACTACCTGCTGTCCTGAAACTTGTGATCATGTATACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTTCCATATGATGAGAATGGTCGAATAATCCTGGAGGAAGGTTATCTTGTATACGAGTGTAATCATATGTGCAGATGCAATAGATCCTGTCCAAATAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTCTTTAAAACGGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCCATTCTACGTGGCACATTTGTGTGTGAATACATTGGAGAAGTTTTGGATGTGAAAGAGGCACAAGATAGGCGTAGAAGATATGGCACAGAGCATTGCAGTTATTTCTACGACATTGATGCTCGTGTGAATGATATGAGCAGATTGATTGAAGGACAGGCTCAATATGTAATTGATGCTACTAAATTTGGAAATGTCTCAAGATTCATCAATCATAGTTGCTCACCAAATCTGGTCAATCACCAAGTCCTTGTAGAGAGCATGGATTCTGAACGTGCACATATTGGTTTTTATGCAAATCGAGATATTGCTTTGGGTGAAGAGCTAACATATGACTATCAGTACGAGCTCGTGCTTCAAGAAGGATCTCCTTGTCTTTGTGAATCCTTGAAGTGTAGGGGACGCCTTTATTAG 4491 0.4135 MEVLPCSGVQYAGESDCTQQSSGAGFVYQEEPNCAENGEKVKLVAAQLNESSHKMQGPQIERQGGLSTYSDCQCIGASCCDCQVDDQNEYCGFHDFEEDIMHEPCLTSDNCISVVDTIESESPNNSREGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHERKKYFVIFFPHTRIYSWADMLLVRSINEFPHPIAYKTHQVGLKMVKDLSVARRFIMRKLVVGMLNMVDQFPFNALTETARDMKIWKEFAMEASRCNGYSDFGRMLLKLHNSILQHHINADWLRHSYPSWNERCQSANSADSVELLKEELFDSILWNGINTLSDAPVQPALSSEWKTWKHDVMKWFLTPPSFSINKDTQQQNSDDLYRANLQVCRKRAKLEVRRADTHASQVEIKAQTVALQADPGFFKNQGTLSTLAAESCKQEGVREVSMAIDSPGHLVDKWNEIVVEHTDADFLHTKERESTPTNEMTVAKSVESGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKSEKPVPLDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISNIPQNTLKRKHEENYTGSEGIFSRDLVLVNVGSPQQLDPVPSIGGDSLHGENNFNEKPMHSENDHNPMESLHCIGSPPYDKKNPCKEGPKRYFLYCESHLPSWLKRARNGKSRILSKEVFTELLRDCSSWEQKIHLHKACELFYRLLKSILSLRNPVPKDVQFQWALTEASKDSSVGEFFKKLVHSEKARMKSIWGFNDDMDISSVMEEPPLLPSTNNDLYDKENAIKCKLCSTEFLDDQELGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWQHVLSVHPVDFKPSKAPEQQTFSTGEESPVKRDQGNSTPLENNSENTGAFRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPRFKKSLAAASYRLRNKANANNLKRHIQETNSLGTGGITIQPQVTETTNIGRLAEHQCSAVSKILFSEIQKTKPRPNNLDILSIARSACCKVSLVASLEEIYGILPEKLYLKAAKLCSEHNILISWHQEGFICPRGCNVSKGQALLSPLKSLPNSSVMPKAVNLCDPTTDDWEVDEFHCIINSQTLKLGSLQKAVVLCDDISFGKESIPVICVVDQELAHSLHINGCNGQNINPSRPWETFTYVTKPMLDQSLILDSESLQLGCACSYTTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNRSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVKEAQDRRRRYGTEHCSYFYDIDARVNDMSRLIEGQAQYVIDATKFGNVSRFINHSCSPNLVNHQVLVESMDSERAHIGFYANRDIALGEELTYDYQYELVLQEGSPCLCESLKCRGRLY* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00619 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 881 902 IPR013087 -
Lapu2g00619 1496 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1496 - -
Lapu2g00619 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 813 834 IPR013087 -
Lapu2g00619 1496 SMART c2h2final6 948 971 IPR013087 -
Lapu2g00619 1496 SMART c2h2final6 879 902 IPR013087 -
Lapu2g00619 1496 SMART c2h2final6 845 868 IPR013087 -
Lapu2g00619 1496 SMART c2h2final6 811 834 IPR013087 -
Lapu2g00619 1496 Pfam Pre-SET motif 1202 1333 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g00619 1496 SMART preset_2 1198 1325 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g00619 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 845 868 IPR013087 -
Lapu2g00619 1496 Pfam SET domain 1352 1472 IPR001214 GO:0005515
Lapu2g00619 1496 Pfam Zinc finger C2H2-type, 3 repeats 847 972 IPR040689 -
Lapu2g00619 1496 MobiDBLite consensus disorder prediction 910 939 - -
Lapu2g00619 1496 SUPERFAMILY SET domain 1190 1486 IPR046341 -
Lapu2g00619 1496 ProSiteProfiles SET domain profile. 1341 1473 IPR001214 GO:0005515
Lapu2g00619 1496 SMART set_7 1341 1479 IPR001214 GO:0005515
Lapu2g00619 1496 MobiDBLite consensus disorder prediction 911 939 - -
Lapu2g00619 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 948 976 IPR013087 -
Lapu2g00619 1496 ProSiteProfiles Post-SET domain profile. 1480 1496 IPR003616 -
Lapu2g00619 1496 ProSiteProfiles Pre-SET domain profile. 1262 1338 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g00619 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 950 971 IPR013087 -
Lapu2g00619 1496 Gene3D SET domain 1179 1479 IPR046341 -
Lapu2g00619 1496 Gene3D Classic Zinc Finger 811 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00619 Lapu-Chr2 5372751 5386477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00619 128 1495 C2H2 Transcription Factor Family AT2G23740 52.299 0.0 1401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu2g00619 Pre-SET 3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00619 - - gmx:100786757 2719.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00619 2 5372751 5386477 Lapu2g00619 2 5372751 5386477 ECH