Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00608 ATGTTTCTTCATCATCGTACAAATCTTGTTATAGTCCTCCTGATCTTGATAGCGTGCATAACAAGAGCGCAAAACCTCACCTGCAATAGGCAATGCGGAAAGCAGAGTCTTCAGTTCCCTTTTGGGTTCTCCGAAGGTTGTGAAATCAGACTAAACTGTTCCGACAACCAAGTCCAACTTCACGAATTTCTGGTCCAGAACGTTACCAGCAGCAACATATTCGTCAATATCCCTGCAAAATGCAATCGCAGCATGCAATCCATTGAGCCACTTTTCCGTAGCAATTTTGCTCCCTCGGTTAACAACAGCTTTCTGGTGCAAGATTGCAGCCAGGTGTTTGGTGGGTGCGTTATTCCTGCTTCGATTTTTAAGGAAAGCTGCGATAAGAAAAGTGGTAATATCAGTTGCTTTTCGAAACAAGATGGGGTGGATGTTGTGACATACAACGATTTGAAAGAAACTAAGTGTAAGTACTTGTTCTCTGGGGTTTCTTTTGGGCAGAGCAAGGAGATTGCGCTGCAGTTTCAGGTGGTCCAGTTGGGGTGGTGGCTTCATGGACAGTGTGATGAATGTTCTAATAACGCTACCTGCACACCGGTCCCTCTCCAAAAAGGGTTTCGATGCCAGTGTATCCATGGTTTCACCGGCGACGGCTTCAGAAGCGGCACCGGTTGCCGGAAAACTTCGGCTTCAAGTTGCAGTGCTTCAACACTAAGTTCTGGGGGATGTGGAAAAGCAACCAAAATCGGTGTTGTTGTTGGAGCGATCATAGCTGGAGCTTTGGTGGTGGCTGGTCTGTTTCTTCTATGCTACTGTGCCAGGCGCCGTTCTATTTGGTTGGGAAAACATACCAGAGTAAAGCGCCAATTACGTGAAGCTGCAGGCAACTCAAGTATACCTTTCTATCCCTACAAAGAAGTAGAAAAAGCCACAAATTCTTTCTCTGAGAAACACAGGCTGGGAACTGGGGCCTTTGGGACAGTTTATGCCGGAAAACTGCACAATGATGAATGGGTTGCTATAAAAAAGTTAAGGCAAAGAGACACCAATAGTGCTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAATTTAGTTCGCCTCTTAGGTTGCTGTATAGAGAAGGGAGAGCAGATCCTTGTTTACGAATATATGCAAAATGGAACACTTTCTCAGCACTTGCAAAGAGAGAGGAGTGAAGGACTACCGTGGACAATAAGACTTACCATTGCTACTGAAACTGCTAATGCTATAGCATATCTCCATTCCGCAATTCATCCCCCAATTTACCACAGAGACATAAAATCTAGTAATATACTTTTGGATTATCACTTCAAATCTAAGATAGCTGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCTCATATCTCAACTGCCCCACAAGGGACTCCGGGTTATGTCGATCCCCAATACCACCAGAACTTTCATCTTTCTGATAAAAGTGATGTGTACAGTTTTGGAGTGGTCTTGGTAGAGATAATAACTTCCATGAAAGCGGTTGATTTTTCTCGACCTCGGAGTGAGGTTAACTTAGCTGCACTTGCTGTAGATAGGATTAGGAGGGGTGCTGTAGATGAGATCATAGACCCCTTCCTTGAACCACATAGGGATGCTTGGACACTACATTCTATTCACAAGGTAGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAATACATTAAACGCAGTGGGTGGGCAACTACGGAGGAAACTGCCTTGGCTTCATCGAGTGGGTCCACTTGTTCATCCCCTCGCAATGGAAGCATCAAGTCACTAAGTGGTATCAAAAAGGCTGGCCAAGGGAGTGAGAGATTGATAGTCCCACAGAAGATTGAGAAATTTTTTCATTCTGTGGAGGTGAAGGACAGCTCTCCCGTATCAGTACATGATCCTATTCATTGGTCGAGTGGACATAGCTCACCTTCGTCAAACAGCTTGTTGGTAAATGTCATCCCCTGA 2046 0.4487 MFLHHRTNLVIVLLILIACITRAQNLTCNRQCGKQSLQFPFGFSEGCEIRLNCSDNQVQLHEFLVQNVTSSNIFVNIPAKCNRSMQSIEPLFRSNFAPSVNNSFLVQDCSQVFGGCVIPASIFKESCDKKSGNISCFSKQDGVDVVTYNDLKETKCKYLFSGVSFGQSKEIALQFQVVQLGWWLHGQCDECSNNATCTPVPLQKGFRCQCIHGFTGDGFRSGTGCRKTSASSCSASTLSSGGCGKATKIGVVVGAIIAGALVVAGLFLLCYCARRRSIWLGKHTRVKRQLREAAGNSSIPFYPYKEVEKATNSFSEKHRLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIKLLSSVSHPNLVRLLGCCIEKGEQILVYEYMQNGTLSQHLQRERSEGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSSNILLDYHFKSKIADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITSMKAVDFSRPRSEVNLAALAVDRIRRGAVDEIIDPFLEPHRDAWTLHSIHKVAELAFRCLAFHSDMRPTMMEVAEELEYIKRSGWATTEETALASSSGSTCSSPRNGSIKSLSGIKKAGQGSERLIVPQKIEKFFHSVEVKDSSPVSVHDPIHWSSGHSSPSSNSLLVNVIP* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00608 681 FunFam Wall-associated receptor kinase-like 20 390 599 - -
Lapu2g00608 681 FunFam Wall-associated receptor kinase-like 14 282 389 - -
Lapu2g00608 681 Gene3D Laminin 187 221 - -
Lapu2g00608 681 Gene3D Phosphorylase Kinase; domain 1 285 389 - -
Lapu2g00608 681 ProSitePatterns Protein kinases ATP-binding region signature. 320 343 IPR017441 GO:0005524
Lapu2g00608 681 MobiDBLite consensus disorder prediction 661 681 - -
Lapu2g00608 681 SMART serkin_6 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00608 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Lapu2g00608 681 MobiDBLite consensus disorder prediction 602 623 - -
Lapu2g00608 681 CDD EGF 191 218 - -
Lapu2g00608 681 SUPERFAMILY Protein kinase-like (PK-like) 294 589 IPR011009 -
Lapu2g00608 681 Gene3D Transferase(Phosphotransferase) domain 1 390 606 - -
Lapu2g00608 681 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 631 IPR044652 GO:0004672
Lapu2g00608 681 ProSiteProfiles EGF-like domain profile. 184 220 IPR000742 -
Lapu2g00608 681 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lapu2g00608 681 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00608 681 Pfam Protein tyrosine and serine/threonine kinase 317 586 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00608 Lapu-Chr2 5292077 5296759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00608 1 679 Receptor kinase-like Gene Family AT2G23450 55.461 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lapu2g00608 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00608 - - vum:124829194 1151.35