Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00600 ATGTCATTTTCGTTGTTCGCCACGCCGCAACAGCAACAGCAACCGCAGCAGTCTCCTTTTCAGCCCCAGCAAACTAGTTTGTTCCTTCCGCAGCAGCAGCAGCAGCAGTTTCAACCACAACAACAGCAGCAGCAGCCGCAACAACAGTTGTTTTTGTTCACTAACGATAGAACACCCGCTAGTTATAGTACCAATTGGGCGGATCTTCATCCTGACTCCCAGAAGATTCTCCTTCAGATTGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCCGTTTCCAACGATGGATTTGAGCTTGACGCGGGCCATATTGTTCAGGAACTTGGTGGAATCAGCACTGGTATGGAACGACAGAAAACTTTGCTTCAGGAACTGATGTCCACTGTTAAGGATATGCTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATACTACGCCCCAGGTTCCTTCATCCCAGTGGGGGTTCATCAAGTGCCACTGCCCCATCACAGAGTCCTGGAGCGACTTTAGCACCTGGTTCAAGTGGCCAACCGACAACTGCATCTATAGTGCCTGTTTTTGATTTCTATAGTGGTCTTCCAAGGAAACCATCTCCATTTTTACAGCAGACAATTTTAAGATTTGAGAAGTATCTTGGCGAGTGCCATCAGTGGATTGAAGAGTTAGAGCAGTTGCTTCTCTTGGACTCCGAGAGAAATGCTTCCAGTAATGGATCCTCTTTATTGCAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCTAAGGTGGAGAGCATTCATCAGTACATTGAATCTATGAAATCATCATACCTAGCTGATCAGCGTCGCCGGGGGGAGGTAAATGACCCATTTTTGGAGGCAGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATCTGCAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCTAGCAGCATTGCCTGCCCCACAGACATCTGCTGCAACTTCATCTTTGTCATCAGGAAGTGGATTCTCTCTTTTTAGTACACCGTCTTCTGCTCCATCGTCTTCTATGTTGTCATCTCTGTTTACAACACCAACTCCTGCTCCGGGACCTCAAACCTCACTTTTTGGTTCTGCAACATCTGTACCTGCATCAACTCCCTCTCTGTTTGGTAATACCACTCCATTGTTTAGTACAACTCCAGCTACAAGTTCACTCTTTTCAACTCCATTTGGTTCAGGCGCTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGATCGAAAAATCCGCGTGCGAAATCCAGAACTGCTCGACGCTGA 1401 0.4675 MSFSLFATPQQQQQPQQSPFQPQQTSLFLPQQQQQQFQPQQQQQQPQQQLFLFTNDRTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTGMERQKTLLQELMSTVKDMLRNTEVAVRSFMILRPRFLHPSGGSSSATAPSQSPGATLAPGSSGQPTTASIVPVFDFYSGLPRKPSPFLQQTILRFEKYLGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSSYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANLQPSTQVAGLFSSSGTLAALPAPQTSAATSSLSSGSGFSLFSTPSSAPSSSMLSSLFTTPTPAPGPQTSLFGSATSVPASTPSLFGNTTPLFSTTPATSSLFSTPFGSGAATGSGASFGPGSKNPRAKSRTARR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00600 466 MobiDBLite consensus disorder prediction 383 408 - -
Lapu2g00600 466 MobiDBLite consensus disorder prediction 1 47 - -
Lapu2g00600 466 Gene3D - 210 300 - -
Lapu2g00600 466 MobiDBLite consensus disorder prediction 167 190 - -
Lapu2g00600 466 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 454 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Lapu2g00600 466 MobiDBLite consensus disorder prediction 310 329 - -
Lapu2g00600 466 Coils Coil 128 148 - -
Lapu2g00600 466 MobiDBLite consensus disorder prediction 443 466 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00600 16 466 NAC Transcription Factor Family AT4G37130 58.580 1.00e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00600 K14307 - gmx:100776992 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00600 2 5234019 5239050 Lapu2g00600 2 5234019 5239050 ECH