Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00587 ATGCGCTGGTTCCCCACCCTCATCTTCTCCCATTCTCATTCATCCTCTTCACCACCTCCGTCAACATCATCCTCCTCAACGCCAACGTCTTCTTCGGCCACTCTCAAATCTTCCCCTTCTGCGTCAACATCCGTCTCCGACACCAGGAAGAACAGCCGCTCCGCCTGGTTCTTCGGAAGCAGCAGAAGGTCCACCCGCTCCAGGAAGCTCAGCCATGTTGCCGACATAGACGCCGTTGTCATCACCCCCTTGTCTCGCTCCACCAGCACTTTCGATCGTTCCTCTACCCCGTCCGCTGGGCCTCAGCCGTTACCCTTGCCCAGAGCCGCCGACTCCCGTTTACCCTCCCCCAAAGATGCCGCCGACAAACCCAACGTCGCCGTCGATTTTACCCTCCCCACGGGTTTTCAAATGCGCAGTGTATTCGCGAGCCAGGGTAATAGAAAAAATATGGAGCACGTGGAGACAAGGTCACCAGGGGTGGTGCCTCAGCAGGACACGAGCGGTTGTGCAAGTACAAGCAGTCAAGGAGATAACTTCTGGTTGAGTGGCCCTGCAAGAAGTGCTCCAACTAGTCCTTTTGCCAGTCCCAGAATCATCCCAAACACTACCAAAACCGATGATTTTGTCCCATACTATTATGTGTCACCCAAAGCCAACCAGTTCTGGTCAGCACCAGAGATGCCAACATCAGACCCTTTAGCTGGGCTCCCACCTCCTGCTTTCTTTGATTTATCAGCATTGCGCACTGATACCACCCTTTCTCCCCGTCAAAGCCCGCGAGGAAAAAGCCCCACCCAACACCCCAAAAGCCCCGCTGCCCATTCTTCTCCTTCTCCTTCTGTACCCCCCGGATTATCCCTTGACATCTCAGTGACACGTAGGGAAAGCACTCATCCTCACTCTGTCCACCCTTTACCCTTACCTCCTTGGGCTGGGCCTGGGGCTCCCTTACTTTCACCACCTGCTACCTTTTCCCCTCCTGTTGCTAAGACCGATGCCTTGCCAATGAAAAATCAGTGGCAAAAAGGGAAACTTATTGGCCGAGGTACTTTTGGATCTGTTTTTGTTGCCACCAATAGGAAAACTGGAGCACTGTGTGCAATGAAGGAAGCAGAAATCTTTTCCGATGATCCAAAATCTGCAGAGTGCATAAGGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATCCAAACATTGTGCAGTATTTTGGTAGCGAAATAGTAGAAGACAGGTTTTATATCTATTTGGAATATGTACATCCTGGTTCAATTAATAAATACGTTCGTGAACATTGTGGTGCAATTACCGAATGTGTTGTTCGGAGTTTCACGCGCCATATTCTTTCGGGGTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTAATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAACATCTAACTGGACACGTTGCAGATCTTTCTTTGAAGGGAAGTCCGTATTGGATGGCTCCAGAGCTTATGCAAGCAGTTGTGCAAAAAGATAATAGCGCTGAAGTAGCTTTTGCCGTTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTTACGGGAAAGCCTCCTTGGAGTGAGTACGAAGGAGCCGCAGCTATGTTTAAGGTTATGAAGGATACACCTCCTATACCAGAAACATTGTCAGCTGAAGGATTTCCATAG 1734 0.4913 MRWFPTLIFSHSHSSSSPPPSTSSSSTPTSSSATLKSSPSASTSVSDTRKNSRSAWFFGSSRRSTRSRKLSHVADIDAVVITPLSRSTSTFDRSSTPSAGPQPLPLPRAADSRLPSPKDAADKPNVAVDFTLPTGFQMRSVFASQGNRKNMEHVETRSPGVVPQQDTSGCASTSSQGDNFWLSGPARSAPTSPFASPRIIPNTTKTDDFVPYYYVSPKANQFWSAPEMPTSDPLAGLPPPAFFDLSALRTDTTLSPRQSPRGKSPTQHPKSPAAHSSPSPSVPPGLSLDISVTRRESTHPHSVHPLPLPPWAGPGAPLLSPPATFSPPVAKTDALPMKNQWQKGKLIGRGTFGSVFVATNRKTGALCAMKEAEIFSDDPKSAECIRQLEQEIKVLSQLKHPNIVQYFGSEIVEDRFYIYLEYVHPGSINKYVREHCGAITECVVRSFTRHILSGLAYLHSKKTIHRDIKGANLLVNSAGVVKLADFGMAKHLTGHVADLSLKGSPYWMAPELMQAVVQKDNSAEVAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSAEGFP* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00587 577 MobiDBLite consensus disorder prediction 153 201 - -
Lapu2g00587 577 SMART serkin_6 341 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00587 577 Pfam Protein kinase domain 342 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00587 577 ProSiteProfiles Protein kinase domain profile. 341 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00587 577 MobiDBLite consensus disorder prediction 253 288 - -
Lapu2g00587 577 MobiDBLite consensus disorder prediction 253 286 - -
Lapu2g00587 577 Gene3D Transferase(Phosphotransferase) domain 1 337 575 - -
Lapu2g00587 577 MobiDBLite consensus disorder prediction 8 70 - -
Lapu2g00587 577 MobiDBLite consensus disorder prediction 160 201 - -
Lapu2g00587 577 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Lapu2g00587 577 MobiDBLite consensus disorder prediction 86 125 - -
Lapu2g00587 577 SUPERFAMILY Protein kinase-like (PK-like) 331 573 IPR011009 -
Lapu2g00587 577 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 16 575 - -
Lapu2g00587 577 MobiDBLite consensus disorder prediction 8 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00587 Lapu-Chr2 5109295 5112954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00587 63 575 MAP Kinase Kinase Kinase AT5G66850 52.984 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu2g00587 Pkinase 1.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00587 - - gmx:100793654 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00587 2 5109295 5112954 Lapu3g01571 3 19146180 19151450 PCT