Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00557 ATGAACTGGGTTCGCGGAGAGTCACTCGGAAGTGGAGCCTTCGCCACCGTCAGCATCGCCGTGCCTGCAAACGGCTCCACTCGGCTCCCTTCTCCCACCGCCGTCAAATCCTCTGATTCCCACAACGCGGGTTTGCTCAAAAACGAAAAGGAGATACTCGATCGCCTTGGCTCTTCCCCTTACATCATCAACTGTTTCGGCCACGATCACACCGTCGAGAACGGCGAGGAGTTCTACAACGTCTTCCTCGAACACGCCGCTGGAGGTTCCCTCGCCGACCAGGTCAAAAAACACGGCGGAAGCCTCCAGGAGCCTTACGTGAGGCGATGCACGAGGTCCATTGTGGAAGGGCTCAAACATATTCACGAGCACGGTTTCGTTCACTGCGACGTGAAGCTTCAAAACGTTCTCGTTTTCGACAACGGCGACGTGAAAATCGCGGACTTTGGGCTCGCGAAGGAGAAGGGGGAGAAACAGGGGAAGTGCGAGTGCAGGGGGACGCCATTGTTTATGTCGCCGGAATCGGTGAACAACAATGAGTATGAGCCGCCGGCGGATATTTGGGCCCTGGGATGCGCCGTCGTGGAGATGGCGACCGGAAAACCCGCGTGGGATGTTCGCGACGGGTCAAGTATTTGGTCATTGTTGATTCGAATTGGAGTGGGTGAAGAATTTCCGAAGATTCCAGAAGAATTGTCGGAAGAGGGGAAGGACTTTTTGGGAAAGTGCTTTGTTAAGGATCCCACGAAGAGGTGGAGTGCTGAGATGCTTTTGAAGCACCCTTTCATCAATGTCGACTCGTTTTCGTTTGAGAAAGTTAATGAGCCGTTCCCGTCGCCCTCACCGAAAACCCACTTCGATTTCCCTCTCTGGGCTTCCACCGTAACGGATTCGCTCCCGTCTTCCCCGGATTCCGATGAGTGGTCGGGGTGGTCGTGTTCGCCGGAGAGTCGTCTTCGGCGGCTTGTCACCTATGAGAGGCCGGAGAATTGGTCAGAATCGGATGGCTGGACGAGCGTTAGGTGA 1026 0.5526 MNWVRGESLGSGAFATVSIAVPANGSTRLPSPTAVKSSDSHNAGLLKNEKEILDRLGSSPYIINCFGHDHTVENGEEFYNVFLEHAAGGSLADQVKKHGGSLQEPYVRRCTRSIVEGLKHIHEHGFVHCDVKLQNVLVFDNGDVKIADFGLAKEKGEKQGKCECRGTPLFMSPESVNNNEYEPPADIWALGCAVVEMATGKPAWDVRDGSSIWSLLIRIGVGEEFPKIPEELSEEGKDFLGKCFVKDPTKRWSAEMLLKHPFINVDSFSFEKVNEPFPSPSPKTHFDFPLWASTVTDSLPSSPDSDEWSGWSCSPESRLRRLVTYERPENWSESDGWTSVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00557 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Lapu2g00557 341 FunFam Mitogen-activated protein kinase kinase kinase 17 2 295 - -
Lapu2g00557 341 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00557 341 Gene3D Transferase(Phosphotransferase) domain 1 2 287 - -
Lapu2g00557 341 CDD STKc_MAPKKK 2 263 - -
Lapu2g00557 341 SUPERFAMILY Protein kinase-like (PK-like) 3 303 IPR011009 -
Lapu2g00557 341 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00557 341 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00557 341 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 300 - -
Lapu2g00557 341 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00557 Lapu-Chr2 4835829 4836854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00557 1 341 MAP Kinase Kinase Kinase AT4G36950 54.046 1.15e-119 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu2g00557 Pkinase 2.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00557 - - gmx:100782937 567.385