Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu2g00556 | ATGGCGGACGAGGAGCCAGTAAGTGGAAGGCGAAGGCCGAGGGGACCGGAGTCCACCGCCCGCAGCGAAGCGTTGGAGCGTCTCAAGGCCCGCCTCCGCGGTGGTCGCCGATCCGACGGCACTGGGCCCCAAATCAGGTTAGAAAATCCTATCTACGACACTGTACCTGAGGACGAGTACAACGCCCTCGTAGCCAAGCGCCGCGAACAGGCGCGCTCCTTCATAGTTGATGATGAAGGAATCGGATACGGCGATGAGGGCGAGGAAGAGGACTGGTCTCAGGCCGGATTCACTCTCTCCTCTGATGAATCCGAAGGTGAATCAGAAAGGCCGAAGCGGAAGAAGGTAGAGAAGAAGGATCCCCAGCCGAAACGGCCTTCTTCGTCGCTCTCCGCAGCTGCGGCCATCATGGGAGGGCAGAGGCTGTCCTCCATGTTCACTTCCTCCGTTTTCAAGAAGAGCAGAGACGACAAAGTCTGCGAGAGCATTGTCGACGATGTTATTGCTGAGTTCGCTGCGGACGAGACCGATCGATTGAGGCGTAGAAGGGCGCAAGGGAATTACTCTTCCGCTTCCAACGCAAACAATGCTCTGCGTGTTAATAACACGTTTAGGGATAAGCCTTCTGTTGATATGATTGGGGCTTTTTCTTCATTGCCGGAACACGGTAACGCTGAGTCTGTTAAGGTACTTGTTGAGAGTGACGGTTTTGACTCGGAGTTTGAGCAAAAGAGCGAGGTCGTTAGTGAAATCGAAGATTTCGGGGGTGGTCGTTCTGAAAATGGGCAGGCACCGATAGTGGGAACTGATGATTGTAATAAAGTTAATGAAGGTATGGTTGAGGAGAAAGAGGTGAAAAGTTTTGAAATTGAAGTGAAAGCGGATGCGAAAAAGGAGGTGTTCACTTTGAACGCGAAGGTTAAAGAAGAGGAGGACCCTGCATTGTCTGCGACTGCCGGTTGGAAGGAAGCTATACGCGGTGCTGGTGGGGTTGATGTTGCTGATTTGAAAGATGCTTGGCAGAACCAACAACACTCAGAGTTTGATCTCGAGGAAGATGGATCACTGCCTTTCTATATATTAGATGCCTACGAGGAGTTTTACGGGGAAAATAGGGGCACCCTTTATCTCTTTGGGAAGGTTAAAACAGGGGATTTGTATCAGAGTTGCTGCGTTATTGTGAAGAACATGCAACGGTGCGTCTATGCAGTTCCTAGCCGACCTTTGCATCGCACTGAAGAGATGACGAGTCTAGAGAGAGATGTCCGGGAGTCTCGAATTTCTTCTGCAGATTTCTTTAAAAAGCTGCAAGATGCAGTTTCTGATGTTAAGAATGAGATAGCACAGCATCTGGTGAATTTGGAAGTTTCGAACTTTAGCATGGCACCTGTTAAGAGGAAATACGCATTTGAACGATCTGAAATCCCTGCTGGTGAAAATTATGTGGTGAAAATCAATTATTCATTCAAGGATCCTGTACTTCCAGTAGATCTCAAAGGAGAAAGTTTCTGTGCTCTCTTAGGAACTGGTTGCAGTGCCCTCGAGCTTTTTCTGATTAAACGGAAGATAAAGGGGCCTTCATGGCTACAGGTTTCAAAGTTTGCTACGAGCTCATCTTCCCGAAGGGTTAGCTGGTGCAAATTTGAAGTGACCGTTGACTCTCCTAAACACATTAGGACTTCAGCACCTTCAAAAATCACTTCTAAGATTCCTCCAGTGGTTGTTGCAGCAATGAACTTGAAAACCACCATAAATGAAAAGCAGAACATAAATGAGATTGTATCTGCATCAGTTGTCTGTTGCAACATGGTTAAGATTGATACCCCTATGATGGCTTCAGAGTGGAAGAGACCCGGAAGGCTGACCCATTTTACTGTTGTTCGTAAACTTGATGGGAGTATATTTCCGATGGGATTCAACAAGGAGGTTACGGACAGAAACTTAAAAGCTGGTTCAAATATTCTGTGTGCTGAAAGCAGTGAAAGAGCTTTGTTGAACCGCTTGATGTTAGAATTGCACAAGTTGGATTGCGATGTTCTTGTTGGACATAATATTTCTGGATTTGACCTGGATGTTCTTCTCCACAGATCCCAGGCTTGCAAAGTAGCAAGTAGCATGTGGTCTAAACTAGGCCGCCTCAATCGATCCACAATGCCAAAACTTGGAAGAAGAAGCAAGGTTTTTGGTTCTGGAGCAGATCCCGGGATCATGTCATGCATTGCTGGACGGCTTCTTTGTGATACATACTTGTGTTCCCGTGACCTATTAAAGGAGGTCAGTTATTCTTTAAGTCACCTTACAAAATCACACCTGAACAAGTTTCGGAAGGAAGTTGCTCCACATGACGTTCCAAAAATGTTCCAATCAGCAGAATCGCTAATGGAGCTCATTGAATACGGTGAAACAGATGCATGGTTGTCTATGGAACTGATGTTTTATTTAAGTATTCTTCCGCTCACACGTCAGCTGACTAATATAAGTGGTAATCTGTGGGGGAAAACTCTTCAGGGTGCTCGAGCACAGAGAGTTGAATATCTCTTGCTGCATACTTTTCATGCAATGAAATATATGGTCCCAGACAAGTTCTCAAACTATGCTAAAGAAACAAAATTGACGAAACGTAGAGTAACTCATGATGTTGAGGATAGCAACTATGATGTAGATATTGACGATGTAAACTATGACAATGATGCTTCTGAAGCTGATAATAAGAAAAGCAAAAAGGGTCCTTCGTATGCCGGGGGACTGGTTTTGGAGCCAAAGAAGGGTCTATATGACAAGTATATATTGCTTCTGGATTTCAACAGTCTTTATCCTTCTATTATTCAGGAATACAATATCTGCTTCACAACTGTTGAAAGATCTTTAGACGGATCTTTTCCACGTCTACCATCTAGTAAAACAACTGGAGTTTTGCCAGAGGTGCTGAAAAATCTGGTAGATCGGAGGAAGAAGGTAAAGTCGTGGATAAAGAATGAAAAAAAGAAGAATGAAAAAGCTGATCCTGTTAAAGTTCAGCAACTGGATATTCAGCAGCAAGCTCTTAAGCTTACTGCAAACAGTATGTATGGGTGCCTGGGATTTTCCAATTCAAGATTTTATGCTAAGCCGTTGGCTGAGCTCATTACTTTACAAGGAAGGGAGATATTGCAGAGTACTGTTGATTTAGTTCAGAATACCTTGAATTTAGAGGTGATCTATGGCGATACTGATTCAATAATGATTTACAGTGGTCTAGATGATATTGAGGAAGCTAATAAAATTGCTGTAAAAGTTATTCAAGAGGTCAATAAGAAATACACATGCTTGGAAATTGATCTTGATGGTTTATATAAAAGAATGCTGCTTCTCAAGAAAAAAAAGTACGCAGCTGTAAAGTTGTTGTTTAAAGATGGCACCCCATATGAGGTGATTGAACGTAAAGGTCTTGACATTGTTCGTCGTGACTGGAGCTTATTAGCTAAAGAATTAGGAGATTTTTGCTTGACTCAAATTTTGTCTGGAGGGTCATGTGAAGACGTAGTAGAGTCAATCCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAACGGAGAAGTACCATTAGAGAAATATGTCATTACGAAGACATTGACTAAACCCCCTGAAGCTTATCCTGATGCCAAGAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAGCAAGGTTACTCTTCTGGCTGTTCTGTTGGTGATACAATCCCTTATATAATTTGCTATGAGCAGGGTGGTAGTTCAGGCAGTGCAGGTGGCATTGCTCAACGTGCTAGACATCCTGATGAACTTAAACAGCAACAAGTGACATGGCTGATTGACATTGATTACTATTTATCACAACAGATCCATCCCGTGGTATCACGTCTTTGTGCATCAATTCAGGGGACAAGCCCGGAAAGACTAGCTGATTGCCTAGGGCTCGATTCGTCGAAGTTTCATCATAAATCAAGTGAAGCTTTAAACGATGATTCTAGAAGTTCACTCTTGTTCGCTGCAGATGATGAGGAGAGGTATCGGGGATGTGAGCCGCTGGTCTTGTCATGCCCCAGTTGCTCTGGTACATTCGAGTGCCCACCCGTCTTTAAATCTATTTGCGCTTCATTGGGAAGTGAAAGGCCAACCAGCGTATCCCCCGAGGAATCTGACTACAATTTCTGGCGCAAGCTGGGCTGTCCTAAATGCCCAGAAGATGTTAAAATTTATCCTGCGATGATAGCTAATCAGGTCAAAAGGCAAGCAGAGACGTTTGTTTTGATGTACTATAGAGGTTTACTAATGTGTGACGATGAAACGTGTAAGCATAAAACGCGAAGTATCAGCCTTCGGTTGGTTGGTGATTCTGAGAGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAATGGCCGTCTGCTTAGAAAGTACACTGAAGCAGACTTGTACAAGCAGCTCTCGTATTTTTGCCATGTGTTTGACACTGTTTCTTGTATAGAAAAGATAGAGGCCAAATCTAGAATAACGATAGAGAAAGAGGTGATCAAAATTAGGCCGATGATTGATCCAGCAGCTTCAACAGCACAGAAGATCAGGGACCGTTGTGCCTTTGGGTGGGTGAGACTGGAGGATCTGGTCATTACAGTTTAA | 4641 | 0.4409 | MADEEPVSGRRRPRGPESTARSEALERLKARLRGGRRSDGTGPQIRLENPIYDTVPEDEYNALVAKRREQARSFIVDDEGIGYGDEGEEEDWSQAGFTLSSDESEGESERPKRKKVEKKDPQPKRPSSSLSAAAAIMGGQRLSSMFTSSVFKKSRDDKVCESIVDDVIAEFAADETDRLRRRRAQGNYSSASNANNALRVNNTFRDKPSVDMIGAFSSLPEHGNAESVKVLVESDGFDSEFEQKSEVVSEIEDFGGGRSENGQAPIVGTDDCNKVNEGMVEEKEVKSFEIEVKADAKKEVFTLNAKVKEEEDPALSATAGWKEAIRGAGGVDVADLKDAWQNQQHSEFDLEEDGSLPFYILDAYEEFYGENRGTLYLFGKVKTGDLYQSCCVIVKNMQRCVYAVPSRPLHRTEEMTSLERDVRESRISSADFFKKLQDAVSDVKNEIAQHLVNLEVSNFSMAPVKRKYAFERSEIPAGENYVVKINYSFKDPVLPVDLKGESFCALLGTGCSALELFLIKRKIKGPSWLQVSKFATSSSSRRVSWCKFEVTVDSPKHIRTSAPSKITSKIPPVVVAAMNLKTTINEKQNINEIVSASVVCCNMVKIDTPMMASEWKRPGRLTHFTVVRKLDGSIFPMGFNKEVTDRNLKAGSNILCAESSERALLNRLMLELHKLDCDVLVGHNISGFDLDVLLHRSQACKVASSMWSKLGRLNRSTMPKLGRRSKVFGSGADPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLSHLTKSHLNKFRKEVAPHDVPKMFQSAESLMELIEYGETDAWLSMELMFYLSILPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHTFHAMKYMVPDKFSNYAKETKLTKRRVTHDVEDSNYDVDIDDVNYDNDASEADNKKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSLDGSFPRLPSSKTTGVLPEVLKNLVDRRKKVKSWIKNEKKKNEKADPVKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGLDDIEEANKIAVKVIQEVNKKYTCLEIDLDGLYKRMLLLKKKKYAAVKLLFKDGTPYEVIERKGLDIVRRDWSLLAKELGDFCLTQILSGGSCEDVVESIHNSLMKVQEEMRNGEVPLEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYSSGCSVGDTIPYIICYEQGGSSGSAGGIAQRARHPDELKQQQVTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFHHKSSEALNDDSRSSLLFAADDEERYRGCEPLVLSCPSCSGTFECPPVFKSICASLGSERPTSVSPEESDYNFWRKLGCPKCPEDVKIYPAMIANQVKRQAETFVLMYYRGLLMCDDETCKHKTRSISLRLVGDSERGTVCPNYPRCNGRLLRKYTEADLYKQLSYFCHVFDTVSCIEKIEAKSRITIEKEVIKIRPMIDPAASTAQKIRDRCAFGWVRLEDLVITV* | 1547 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu2g00556 | 1546 | PRINTS | DNA-directed DNA-polymerase family B signature | 929 | 942 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Lapu2g00556 | 1546 | PRINTS | DNA-directed DNA-polymerase family B signature | 1065 | 1073 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Lapu2g00556 | 1546 | PRINTS | DNA-directed DNA-polymerase family B signature | 1012 | 1024 | IPR006172 | GO:0000166|GO:0003676|GO:0003887 | |
| Lapu2g00556 | 1546 | SUPERFAMILY | DNA/RNA polymerases | 903 | 1315 | IPR043502 | - | |
| Lapu2g00556 | 1546 | ProSitePatterns | DNA polymerase family B signature. | 1067 | 1075 | IPR017964 | GO:0000166|GO:0003676 | |
| Lapu2g00556 | 1546 | Gene3D | - | 571 | 886 | IPR036397 | GO:0003676 | |
| Lapu2g00556 | 1546 | Pfam | DNA Polymerase alpha zinc finger | 1339 | 1542 | IPR015088 | GO:0003887|GO:0006260 | |
| Lapu2g00556 | 1546 | Pfam | DNA polymerase family B | 830 | 1299 | IPR006134 | GO:0000166|GO:0003677 | |
| Lapu2g00556 | 1546 | Gene3D | DNA Polymerase alpha, zinc finger | 1338 | 1531 | IPR038256 | - | |
| Lapu2g00556 | 1546 | CDD | DNA_polB_alpha_exo | 571 | 822 | - | - |
Showing 1 to 10 of 32 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu2g00556 | K02320 | - | gmx:100798779 | 2657.48 |
Showing 1 to 1 of 1 entries