Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00553 ATGACTATCATTAAGGAAGAGCAACAACAAAATCAAATGGCTGGCCACAAAGAACTCCGTCATAAAAGTCTCCTTCAGAGCGATGCACTCTATCAGTATATACTTGAAACCAGTGTGTATCCAAGAGAGCACGAGAGCTTGAAGGAGCTACGAGAGTTGACGGAAAAACACCCTTGGAACCTCTTAGCTACACCACCTGACGAAGGACAACTTCTAGCCATGCTACTGAAGCTCATCAATGCCAAGAACACCATGGAGATAGGCGTCTACACTGGTTACTCCTTGCTTTCCACTGCCCTCGCTCTCCCATCTGATGGAAAGATATTGGCAATGGATGTTAACCGGGAATACTATGAACTGGGGTTGCCTGTGATTCAAAAGGCTGGAGTGGCTCACAAGATTGACTTCAGAGAAGGGCAAGCTCTTCCTCTTCTTGATCAACTCATCAAAGACGAGAAGAACAAGGGAACCTTCGATTTCATCTTCGTGGATGCTGATAAGGATAACTACTTGAACTACCACAATAGGGTGATTGAGCTTGTGAAGGTTGGGGGAATCATCGCCTACGATAACACCCTATGGAACGGCTCTGTGGTCGCCCCACCCGATGCGCCTCTCTTGGATTACATTAAATATTATCGCGATTTTGTGATGGAGCTCAACAAAGCTCTTGCACTTGATTCAAGGGTTGAGATTTGCCAGCTTCCCGTTGGTGACGGCATTACCCTGTGCCGCCGCATCATCTGA 747 0.4685 MTIIKEEQQQNQMAGHKELRHKSLLQSDALYQYILETSVYPREHESLKELRELTEKHPWNLLATPPDEGQLLAMLLKLINAKNTMEIGVYTGYSLLSTALALPSDGKILAMDVNREYYELGLPVIQKAGVAHKIDFREGQALPLLDQLIKDEKNKGTFDFIFVDADKDNYLNYHNRVIELVKVGGIIAYDNTLWNGSVVAPPDAPLLDYIKYYRDFVMELNKALALDSRVEICQLPVGDGITLCRRII* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00553 248 Gene3D Vaccinia Virus protein VP39 12 248 IPR029063 -
Lapu2g00553 248 FunFam Caffeoyl-CoA O-methyltransferase 1 16 248 - -
Lapu2g00553 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Lapu2g00553 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Lapu2g00553 248 PANTHER O-METHYLTRANSFERASE-RELATED 20 247 - -
Lapu2g00553 248 Pfam O-methyltransferase 36 247 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00553 Lapu-Chr2 4780926 4782459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00553 6 247 Monolignol Biosynthesis Gene Families AT4G34050 77.686 7.00e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00553 K00588 - gmx:100795858 470.7