Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00550 ATGGCGTCGAAGCCTTCGCCTTCGCCCTCTTCTTCCAGATCGGAGCTCATCGTCGATCCTTCCGGTGAGAAAGTGGATGCTGCTAGTCAGACTGTTAAAGATGTGTTGCCGGTTATTGATTCTTTAAAGAAACAAGTTGCTGTGGAACGGATAGCTTATGTGAAGAATAGAATAGAGGAAAACAGACGGAATCTGGTTGGTGTCACAAATCATGTCTGCAAAATGTCAATGGAGAGAAGGAACAGCGGTGTTGCTGATACTAACAGAAGTCTGGACCTACTTACAAAGAGGCAAAAAGATGCAATTGATATGCACAATGGTGTTCATGCAAGTAATGGTGATGTAGAGAACAATGGCTATCATGAAGATAGCCATGGTTCTACCGCAGTTCTTCTAGGGTCTAACGTTGCTGTTAAGAATGCTGTTCGTCCTATCAAATTGCCTGAAATAAAAAAATTGCCTCCTTATACTACATGGATATTTCTGGATAGAAATCAAAGAATGACAGAAGATCAGTCGGTTGTAGGCCGAAGACGAATTTACTATGATCAAAATGGAGGAGAAGCACTTATATGCAGTGACAGCGAGGAGGAAATTATGGAGGATGAAGAGGAGAAAAGAGAATTTATAGAATCAGAAGATTATATACTTCGCATGACTGTCAAAGAATTCGGTTTAACTGACATCGTTATGGAGTCATTAGCTCAGTGTTTTTCTAGAAACACTAATGAAATTAAGGCAAGGTATGAAGCTCTAAGTATTCAAGACAATGCTGATGGGTCTTCCAAGGCTGTAGATTCTGGAGAGAATTCTCATAGTGGCAATTCTTTTCTGGAAAAGGATCTGGAAGCCGCCCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTTGATTGTAGATTGCATGGATGTTCGCAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTATATGGATCCCTCCTGATAGTGAAAATGCACCCTGTGGGCCATATTGTTTCCGATCGGTGCTTAAGTCGGAAAGATTTGTCAAAACATCTTCTGCTCAGGCTGATGGTGAAGAGAAGTGCTCTGGTGGCGTTTTATCCAGGAAAAAGTCTTCTGCTAAAAGGCGGGTAAAAGGAAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAGAATGTATCAGAGAGTAGCGACTCAGAGAATGGTCCTGGACGAGATGCTGTTTCAGCGTCTCACTCAGCTCCTCCTAAAACTAAACCTGTGGGGAAAGCTGGAATTGGTAAGAGGAACAGTAAGCGAGTGGCAGAACGAGTCTTAGTATGCATGCAGAAAAGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCCATTAGTGAAGCTCTTGAGCGTTCATCGAATGATATGGTCACTGATCAACATGCTATGAGCAGTGAAGACAACACAAGGAAAGAAGATTTTGTAGATGACAATGTTTGTAAACAAGAAATCACAGACAATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGCAGAAACAGTTGCTTAATAGCTAGGAATCTCTTAAATGGTCTAAAGACTTGTTGGGATGTTTTCCAATACATAAATTGTGAAGAAGGAAAGATGTCCGGTCCTCCTGGGGATGTTGCAAATTCCCTTTTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGAAGAAGGTCTAGGTTTTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTACACCTGGAAATCTGCTGCTTATCATTCCATCAGGAAAAGGATCACAGAGAGAAAGGATCAGCCCTGCCGGCAGTATAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCTAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGCAAAAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCCGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTACTCTTGGGATTCCTAGCCAGAGAGGGGACAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCAGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAACATGAATACCTTGGAGAGTATACAGGAGAGTTGATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATTTAAATGATCAGTTCGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCGAACCATTCGCCTGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGTATTTTTGCCAAGGAACGGATTTGCGCCGGGGAGGAACTGTTCTATGATTATCGTTATGAGCCCGATAGGGCCCCTGCCTGGGCTCGGAAGCCTGAGGCATCTGGTTCAAAAAAAGAGGACGGGGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2583 0.4262 MASKPSPSPSSSRSELIVDPSGEKVDAASQTVKDVLPVIDSLKKQVAVERIAYVKNRIEENRRNLVGVTNHVCKMSMERRNSGVADTNRSLDLLTKRQKDAIDMHNGVHASNGDVENNGYHEDSHGSTAVLLGSNVAVKNAVRPIKLPEIKKLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIMEDEEEKREFIESEDYILRMTVKEFGLTDIVMESLAQCFSRNTNEIKARYEALSIQDNADGSSKAVDSGENSHSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPIWIPPDSENAPCGPYCFRSVLKSERFVKTSSAQADGEEKCSGGVLSRKKSSAKRRVKGSQSESASSNAKNVSESSDSENGPGRDAVSASHSAPPKTKPVGKAGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEALERSSNDMVTDQHAMSSEDNTRKEDFVDDNVCKQEITDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEEGKMSGPPGDVANSLLEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00550 860 SMART set_7 711 832 IPR001214 GO:0005515
Lapu2g00550 860 MobiDBLite consensus disorder prediction 376 403 - -
Lapu2g00550 860 MobiDBLite consensus disorder prediction 1 17 - -
Lapu2g00550 860 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 860 IPR025778 GO:0031519
Lapu2g00550 860 MobiDBLite consensus disorder prediction 834 860 - -
Lapu2g00550 860 ProSiteProfiles SET domain profile. 711 826 IPR001214 GO:0005515
Lapu2g00550 860 Gene3D SET domain 611 828 IPR046341 -
Lapu2g00550 860 MobiDBLite consensus disorder prediction 355 427 - -
Lapu2g00550 860 SUPERFAMILY SET domain 585 831 IPR046341 -
Lapu2g00550 860 CDD SET_EZH 711 827 - -
Lapu2g00550 860 MobiDBLite consensus disorder prediction 834 853 - -
Lapu2g00550 860 MobiDBLite consensus disorder prediction 460 479 - -
Lapu2g00550 860 Pfam SET domain 722 825 IPR001214 GO:0005515
Lapu2g00550 860 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 29 858 IPR045318 GO:0006338|GO:0042054
Lapu2g00550 860 Pfam CXC domain 649 680 IPR041355 -
Lapu2g00550 860 SMART CXC_2 645 682 IPR033467 -
Lapu2g00550 860 MobiDBLite consensus disorder prediction 1 23 - -
Lapu2g00550 860 ProSiteProfiles CXC domain profile. 597 696 IPR026489 -
Lapu2g00550 860 Coils Coil 193 213 - -
Lapu2g00550 860 FunFam Putative histone-lysine N-methyltransferase EZH2 611 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00550 Lapu-Chr2 4757996 4768045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00550 700 829 C2H2 Transcription Factor Family AT2G23740 27.211 1.03e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu2g00550 SET 8.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00550 - K11430 gmx:100809840 1559.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00550 2 4757996 4768045 Lapu2g00550 2 4757996 4768045 ECH