Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00545 ATGGAGGGTCAAGGAAGAAGAGAAGGAGGAGAGAGAGAAGCCACCAGGAAGCGAAGCGGCGTGGCGGTGGAGGGAGAGAGAAGATACAAAGGAATAAGGATGAGGAAGTGGGGCAAGTGGGTCGCCGAAATTAGGGAACCCAATAAGCGTTCAAGGATTTGGCTCGGTTCCTATTCCACCCCAGTCGCCGCCGCACGTGCCTACGACACCGCCGTCTTTTACCTCCGGGGACCCTCCGCGCGCCTCAACTTCCCCGACCTTCTTGTCGGGGAGGGGGCTGCCCTTGTTGCCGGTTGCGACATGTCAGCAGCCTCTATTAGGAAAAAGGCTACCGAGGTCGGTGCCAGAGTCGATGCTCTCCAGGCAACCCTCCACCACCACCACGTGCCGCCCCCGCCCCCGGAGCTTCTGTCGCGGGGAGACGGAGGCGGGTCCGGGGATTTCGCGGTTGACCTGAACAAGATGCCGGAACCCGAGAGTGAGGACTGCGAGTGGGATGTGAATTGA 507 0.6075 MEGQGRREGGEREATRKRSGVAVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLVGEGAALVAGCDMSAASIRKKATEVGARVDALQATLHHHHVPPPPPELLSRGDGGGSGDFAVDLNKMPEPESEDCEWDVN* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00545 168 MobiDBLite consensus disorder prediction 125 168 - -
Lapu2g00545 168 FunFam Ethylene-responsive transcription factor 2 27 86 - -
Lapu2g00545 168 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Lapu2g00545 168 MobiDBLite consensus disorder prediction 1 20 - -
Lapu2g00545 168 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Lapu2g00545 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 162 - -
Lapu2g00545 168 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Lapu2g00545 168 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Lapu2g00545 168 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
Lapu2g00545 168 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Lapu2g00545 168 PRINTS Ethylene responsive element binding protein signature 67 87 IPR001471 GO:0003700|GO:0006355
Lapu2g00545 168 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00545 Lapu-Chr2 4697606 4698567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00545 14 162 AP2-EREBP Transcription Factor Family AT3G50260 61.074 8.67e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lapu2g00545 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00545 K09286 - gmx:100527066 253.447