Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00516 ATGTTTCCTGAATCAAATGCGACGAGTGACATCATTATTGGACTCCTCGACACTGGTGTTTGGCCCGAAAGCAAGAGTTTTGACGATGCCGAACTAGGACCTGTTCCTACGAGTTGGAAAGGCAAATGTGAATCAGATAGCTTGGACCCGGAAAAGGTTAAGGGGAAAATTGTGTTTTGTGAACGTGGAAATATTTCAAGGGTGGAGAAAGGGCTTGTGTTGAAATCTGCTGGTGGTGTGGGCATGTTGTTAGCCAATGCAGAAATTGATGGAGAGGAATTGGTGGTGGATGCCCATCTTTTGCCAACAGCTGCAGTGGGTTTCAGTGCCTCCAAAGCCATCAAGATCTACTTGCAACATGCACAAAATCCAACAGCTACACTTGTGTTCCCGGGAACAAAGGTAGGCATTGAGCCGTCGCCAATTGTTTCGGCATTTAGTGCTCGAGGTCCAAACCCGATCACACCAGAGATATCGAAACCTGATTTCATTGCTCCTGGTGTAAACATCTTAGCCGCATTTACGAAAGATGCAGGTCCCACTAACATCGACCAGGATGATAGGCGTGTGGATTTTAACATAATCACAGGAACATCCATGTCGTGTCCTCACGCCAGTGGTATAGCAGCTTTGATTAAATCAGTTTATCCAAATTGGAGCCCAGCTGAAATTCGGTCTGCGCTTATGACCACAGCTTATACGTCTTACAACAATGGTAAAAAACTACTAGACAGTGCATCAAATTCCCCTTCAACACCGTTTGCAGTTGGTGCCGGACAAGGGAACCCCATTGCCGCGCTTAATCCAGGACTTGTTTATGACTTGACAGCGGATGATTATCTGAACTTCCTTTGTGCATCAAACTACACAGCTGATAAGGATTCAGGCAGTGGCAAGGAGAAAGTTAAGCTGTGA 915 0.459 MFPESNATSDIIIGLLDTGVWPESKSFDDAELGPVPTSWKGKCESDSLDPEKVKGKIVFCERGNISRVEKGLVLKSAGGVGMLLANAEIDGEELVVDAHLLPTAAVGFSASKAIKIYLQHAQNPTATLVFPGTKVGIEPSPIVSAFSARGPNPITPEISKPDFIAPGVNILAAFTKDAGPTNIDQDDRRVDFNIITGTSMSCPHASGIAALIKSVYPNWSPAEIRSALMTTAYTSYNNGKKLLDSASNSPSTPFAVGAGQGNPIAALNPGLVYDLTADDYLNFLCASNYTADKDSGSGKEKVKL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00516 304 Gene3D - 45 136 - -
Lapu2g00516 304 ProSiteProfiles Serine proteases, subtilase domain profile. 1 267 - -
Lapu2g00516 304 ProSitePatterns Serine proteases, subtilase family, serine active site. 197 207 IPR023828 -
Lapu2g00516 304 Pfam Subtilase family 115 259 IPR000209 GO:0006508|GO:0008236
Lapu2g00516 304 Gene3D Peptidase S8/S53 domain 10 44 IPR036852 GO:0004252|GO:0006508
Lapu2g00516 304 Gene3D Peptidase S8/S53 domain 137 280 IPR036852 GO:0004252|GO:0006508
Lapu2g00516 304 SUPERFAMILY Subtilisin-like 8 272 IPR036852 GO:0004252|GO:0006508
Lapu2g00516 304 Pfam PA domain 49 114 IPR003137 -
Lapu2g00516 304 PRINTS Subtilisin serine protease family (S8) signature 8 27 IPR015500 -
Lapu2g00516 304 PRINTS Subtilisin serine protease family (S8) signature 196 212 IPR015500 -
Lapu2g00516 304 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 45 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00516 Lapu-Chr2 4410582 4412857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00516 1 45 Subtilisin-like Serine Gene Family AT5G67360 60.000 6.52e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00516 - - gmx:100801866 421.009