Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00515 ATGACTAATGGGAGGCCAAAATTCACAACATCAATTATACCGAACAAGGTCGCATCTATGGGTCGGGGTTGCAGAGAACATGGCTTCAGTAGCGCTTCTGAATCAGTTTGGACAGATTTTCCGGTAGAGAACGCCTACGAGCTGTTAGGAGTGTCCGAGACCAGTTCCTTTACCGAAATTAAAGCGTCGTTTCGAAAATTGGCCAAAGAAACTCACCCGGACCTTGCTGAGTCAAGTAATGATTCCAGTGCGTCTCGACGATTTGTGCAAATTCTGGCTGCCTATGAGATTCTTTCAGATTCTCAAAAGAGAGCCCATTATGACATGTACCTGTTGTCTCAGAAAAAGCTCATGGCAAAGCATTCTGGACAGGGTTCAAAATTGTACATTTACAAATCACAAGCTAATATGTTCAAGGAGATGGAAGTTGTTGAATGGTTAAAATGGTACAGATTAACTATAAGTAATATTTTGTCAGAAAAGAAGGTGGTAGATGGCACAGGCTATTTTGATGTACTCGAGAGAGATTTTTATTCAGCTCTTCATGCAGCATACTATGGTCCTGAAATTGATTCTATGCCCATGGAACTTCTTCCTAACTGCTTTGAGGCTGAGGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTAGTGTCAGGTCGTGATCTTTTCGGAATGGTTTGCCTAGCCAACAATGTTCCAGAGATATCAACTATCAACAATGAAAAGTTAACATCTTTTAGATCCTTCCATTCAGATCCGTGTCAATCTATAACAAATGCGAATGTTTACAGGAATGCAGAAAGATCAGTTGATTTTGAAACCTACCAAGGTCTCAGCTCTAAAAGTTCAAGTATTGTATCAGATGCGTATAGACATCTTGAATTGCACGTCTCTGGAAGAGTGGTTGCTACAGCATCTAGAGCCCTACCTAGAGGCTGTTTTGATGAAATGCAGACAGAAGACTCTGAAGATCACATTCATGTGTTCCTTAACTTATACGACGATCCGAAACATATCAGCAGTGATTTTTGGAAAGGTTACCTAGCAAATGGTGCAGTTGGAAGAAGAATTCATTTGGGAACTATATCTGGACTTGGGAGCAGTCCAGATGAAGGTTGTTGTTATGTTTACAATGACAAGGGTACAAAGACCCATGCGATTATGAAGCATAGAACATTGATGGTGAAGCATATGCACTGGTATCAAGTGGGTGAGAAAGTTTCAGTTTGCGAGTGTAGATGCACTAGAGCGCATTTACCCCCAAGCAAATTTTGGCTATTTGAGCCTCGCTGTGGCTTCCATGACATAGGGGGTTGGTATGTGGAAACATATGGCAAAGATAATAACGGTCGTACAAAGCCATCACAAAGGTTTTGGGATGGCTTGGACTATAACATGCAAGCTGACAGAAGACTGCATCCAGCAATGTATCTGTTTGCTCTTGCATATCGGACACTTGATCTTGAATACGCTAAAGCAAGCAAGAAATCATTTAGGCATGTTGTTGGAGCACAAATGTTTCGAATTATTCATTGGTGCAAGAAACTTGTTCAATAG 1563 0.4127 MTNGRPKFTTSIIPNKVASMGRGCREHGFSSASESVWTDFPVENAYELLGVSETSSFTEIKASFRKLAKETHPDLAESSNDSSASRRFVQILAAYEILSDSQKRAHYDMYLLSQKKLMAKHSGQGSKLYIYKSQANMFKEMEVVEWLKWYRLTISNILSEKKVVDGTGYFDVLERDFYSALHAAYYGPEIDSMPMELLPNCFEAEERSSYETPEVLHLVSGRDLFGMVCLANNVPEISTINNEKLTSFRSFHSDPCQSITNANVYRNAERSVDFETYQGLSSKSSSIVSDAYRHLELHVSGRVVATASRALPRGCFDEMQTEDSEDHIHVFLNLYDDPKHISSDFWKGYLANGAVGRRIHLGTISGLGSSPDEGCCYVYNDKGTKTHAIMKHRTLMVKHMHWYQVGEKVSVCECRCTRAHLPPSKFWLFEPRCGFHDIGGWYVETYGKDNNGRTKPSQRFWDGLDYNMQADRRLHPAMYLFALAYRTLDLEYAKASKKSFRHVVGAQMFRIIHWCKKLVQ* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00515 520 CDD DnaJ 44 100 IPR001623 -
Lapu2g00515 520 ProSiteProfiles dnaJ domain profile. 44 111 IPR001623 -
Lapu2g00515 520 ProSitePatterns Nt-dnaJ domain signature. 88 107 IPR018253 -
Lapu2g00515 520 SMART dnaj_3 43 103 IPR001623 -
Lapu2g00515 520 PRINTS DnaJ domain signature 83 103 IPR001623 -
Lapu2g00515 520 PRINTS DnaJ domain signature 64 79 IPR001623 -
Lapu2g00515 520 PRINTS DnaJ domain signature 46 64 IPR001623 -
Lapu2g00515 520 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 24 519 - -
Lapu2g00515 520 Pfam DnaJ domain 44 108 IPR001623 -
Lapu2g00515 520 SUPERFAMILY Chaperone J-domain 42 114 IPR036869 -
Lapu2g00515 520 Gene3D DnaJ domain 36 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00515 Lapu-Chr2 4403185 4409442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00515 46 110 C2H2 Transcription Factor Family AT1G74250 42.647 4.29e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00515 - - vra:106777675 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00515 2 4403185 4409442 Lapu2g00515 2 4403185 4409442 ECH