Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00503 ATGAGTTGCAACGGGTGCCGCGTCCTTCGAAAGGGTTGCAGCGAGTCTTGCATCCTGCGGCCCTGTCTACAGTGGATCGATACTCCCGAGGCCCAAGGTCACGCCACTGTCTTTGTAGCCAAATTCTTCGGTCGTGCCGACCTCATGTCCTTCATTTCCAACGTCCCTGAGGCCCAAAGGCCCGCTCTGTTTCAGTCTCTGCTGTTTGAAGCTTGCGGACGCACGGTCAATCCCGTCAACGGTGCTGTTGGCCTTTTGTGGACCGGAAACTGGCACGTGTGCCAGACGGCGGTTGAGACGGTCCTCCGTGGTGGCACCCTCAGGCCTGTGCCTGAACTTCTTGGCTTGGACACTCCCACCCCCGACGATGCCTCCGAAGGCGAAGTTACCTGTACCGACAAATGGAGGGTTCGAGATCCAACCCCGATTTTCCGGTTGCCGGGTTCGATTTCTGATAAGGCTGCTTCCGGCGGTAAACGCAAGCGATTGGAAGAGCTTGCAAAGCTGCAGACGGCTACCACTGATCTCAATCTCCGGTTGACACCGAGTTTCCTGCAGAACGCGGCGAGCTTCGGTTGCCGGCAGGAAATTCGATGGCCGAGATCGCCGTCAATAAACTCGGAGGAGTCCGGGACCACGACGGCGGCCTGCTTGGAAAGCGGGATCGGAGATCATTATGCTCCCGACGGAGGCCGGAAAGTACTGAACCTCTTCATTTGA 720 0.5778 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEAQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQTAVETVLRGGTLRPVPELLGLDTPTPDDASEGEVTCTDKWRVRDPTPIFRLPGSISDKAASGGKRKRLEELAKLQTATTDLNLRLTPSFLQNAASFGCRQEIRWPRSPSINSEESGTTTAACLESGIGDHYAPDGGRKVLNLFI* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00503 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 209 - -
Lapu2g00503 239 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lapu2g00503 239 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00503 Lapu-Chr2 4314435 4315235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00503 1 239 AS2 family AT5G67420 54.054 8.17e-81 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu2g00503 LOB 3.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00503 - - gmx:100802764 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00503 2 4314435 4315235 Lapu3g01475 3 17114082 17115529 ECH
Lapu2g00503 2 4314435 4315235 Lapu2g00503 2 4314435 4315235 ECH
Lapu2g00503 2 4314435 4315235 Lapu7g02274 7 39102539 39104304 PCT
Lapu3g01475 3 17114082 17115529 Lapu2g00503 2 4314435 4315235 PCT