Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00501 ATGGGTGAAGAACTAAAATTTGTGGTGACTGTGAGAGAGTACGACCCCAATAGAGACAGAGAAAGAGTAGAAGCTGTTGAAAAGATATGTGAAGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACCGACATGCTGGGTGACCCAATTTGCAGGGTTCGCCATTCGCCTGCTTTTCTTATGCTGGTGGCGGAGATGGGCGAAGAGGTAGTTGGAATGATAAGAGGATGCATAAAAATGGTGACATGCGGGAAAAGACTCTCGAGGAACGGAAAACACAATGCCAATAATGCTAAACATGTTCCAGTGTACACTAAAGTGGCCTACATACTAGGCCTTCGCGTTTCTCCTAATCAAAGGAGAATGGGTATAGGGTTGAAGCTGGTGCAGAGAATTGAGGCGTGGTTCAGGGATAATGGAGCCGAGTATTCGTACATGGCAACGGAAAACGACAATTTAGCTTCTGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCGTCCATGCTTGTCAACCCCGTTTTCGCCCACAGAGCAAGGGTGTCCCCAAAGGTCACAATCATTAACCTTTCCCCTTCCGACGCAGAGGTTCTCTACCGTCGCCGTTTCGCCACGACGGAGTTCTTCCCGCGCGACATTGACTCGGTTCTGAAGAACAAGCTGAGTCTGGGGACGTTCCTGGCGGTCCCGGACGGGTCCTACAAGGCTGAGACATGGCCCGGGCCAGATCTTTTCCTGTCGGACCCACCAAAGTCCTGGGCCTTGGTGAGCGTGTGGAACTCTAAGGAGGTGTTCACACTCGAGGTGCGGGGCGCGTCGCGCGTGAAGCGCACGCTCGCGAAGACGACGCGGGTGGTGGACCGGGCTCTGCCGTGGCTGCGGGTACCCTCGATCCCGGATTTGTTCAGGCCGTTCGGGTTTCACTTCATGTACGGGCTTGGAGGGGAAGGCCCAGAGGCGGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGCTCACAACCTCGCGATGGAGAAAGGGTGCAGGGTGGTGGCCACGGAAGTGTCACCAAACGAGCCCTTAAGGGTGGGTATACCCCACTGGAAGATGCTGTCGTGTGACGAAGATTTATGGTGTATGAAGCGGTTGGGTGAGGATTACAGTGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGAATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1221 0.5348 MGEELKFVVTVREYDPNRDRERVEAVEKICEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEMGEEVVGMIRGCIKMVTCGKRLSRNGKHNANNAKHVPVYTKVAYILGLRVSPNQRRMGIGLKLVQRIEAWFRDNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSMLVNPVFAHRARVSPKVTIINLSPSDAEVLYRRRFATTEFFPRDIDSVLKNKLSLGTFLAVPDGSYKAETWPGPDLFLSDPPKSWALVSVWNSKEVFTLEVRGASRVKRTLAKTTRVVDRALPWLRVPSIPDLFRPFGFHFMYGLGGEGPEAVKMVKALCGFAHNLAMEKGCRVVATEVSPNEPLRVGIPHWKMLSCDEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00501 406 CDD NAT_SF 60 142 - -
Lapu2g00501 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016747
Lapu2g00501 406 FunFam Probable N-acetyltransferase HLS1-like 18 171 - -
Lapu2g00501 406 Pfam Acetyltransferase (GNAT) family 54 164 IPR000182 GO:0016747
Lapu2g00501 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 166 IPR016181 -
Lapu2g00501 406 Gene3D - 17 174 - -
Lapu2g00501 406 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00501 Lapu-Chr2 4254019 4255695 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu2g00501 Acetyltransf_1 3.9e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00501 - - gmx:100800613 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00501 2 4254019 4255695 Lapu2g00501 2 4254019 4255695 ECH
Lapu2g00501 2 4254019 4255695 Lapu3g01472 3 17024138 17025724 PCT