Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00499 ATGAAAGCTCGTCACTTGAGCTTCTTCTACTTCTGCATCATCGTCCTCGCACTGTTCCTCTCCCTGTCCCTGTCCATCCCAGTCAACACTGCAAAAGGGGTCAACAGTAGTACCAGCGCCAATGAATCTGGCACAAGAAGAATTCTGCACCAGCCATTGTTCCCGGCGAGTTCGGCACCTCCGCCACCACTTCCGGTGGAGGCCCCTCCCTCTCCGGAAGGCGGCAACATCCCCTTCTTCCATGAGTACCCGGCGGGCCCCCCGCCGGATCAGAGCCAAGCAGCACCTTCCAATTCCAACACTTCAATTGCAAACCCAACTGCAACACAACCCACAAAGGGAACAAAGAAAGTAGCAATCGCGATCTCAGTGGGGATTGTAACGCTTGGAATGCTCTCGGCGTTGGCCTTCTTTTTGTACAAACACAGAGCCAAACACCCTGTGGAGACTCAAAAACTCGTTGGGAGTGGGAATAACAATAACAATAGCCATATCAATATTCCAAACAGAAACGAGGTTGATTCAACTGTGCCACCTTCGAGTTTCCTCTACATTGGGACAGTGGAACCCACGCGAGCCTCTACCAACGACTCGCGAGATAACAGAGATGTTAATAAGGCCAACAGATCGCCGTATCACAAACTCAAACGATCCGATCGCTACCGTCCCAGTCCTGAGTTGCAGCCAATGCCACCGCTCAGCAAGCCTCCCGACGGAAACTACCCGCCGGCGGTCTCCTCCTCCTCCGAGTCCGATGAGGAGAGCCGCGGCACGGTGTTTCACTCGCCGCAGAACTCGTCGGTCGATGGATACTACACGCCGGCTTCGCGGCAGAGTTCTCTCGTTAACGGTAGTCCCGCGAAGCGTGACGTGAATTCCACGCCCACACCCGTTGTTCCGTTTTCCAAGAGAACTTCGCCCAAGTCACGCGTTTCGGCACCCTCGCCGGAGATACGCCACGTCATCATTCCGTCTATAAAGCAGCCGCCACCACCGTCGTCGCCGCCACCTAAGCATTCCAGAAAGCCGAAATTCGCGGCTCCTCCCCCTCCTCCAAATTTGAAGCAGCTTCAGTCAACAACCGACACTGTTTCGCGTGGTTCAAAGACTTCACTCAATCCTCCTCCTCCTCCTCCACCACCACCGCCGCCACCGCCGCCACCGCCGCCTCCACGGAAATCAGTGTCTCCGGCAGTTAGTGCTTCCTCTAATTCTGCATCTGTAAAGAGACATTCTTGGTCACCAATTGAATGCAGTTTGACGAAAAGTTCAGAAGAGGTTGAACAGAGTGTGAGCTCTTCCGAGAGGCTTGAAGCCAATGACAGGGATGGAGCCAAACCAAAATTAAAGGCTCTGCATTGGGATAAAGTGCGCGCAACCTCAGACCGTGCTACAGTGTGGGACCAGATAAAATCAAGCTCGTTTCAGTTAAATGAGGACATGATGGAATCGTTGTTTGGATGCAAGGCCACGAATTCTGCCCCGAAAGAACCTCCCAGAAAATCAGTTCTTCCTTCAGTTGATCAGGAGAACAGGGTTTTAGACCCAAAGAAGTCACAGAACATAGCTATACTGCTCAGGGCTTTGAATGTCACCAGAGATGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGCACTGAGCTATTGGAAACACTAGTAAAGATGGCTCCGACTAAAGAGGAAGAGATAAAGCTTAAAAACTATGATGGTGATCTCTCAAAACTGGGATCTGCAGAAAGGTTTCTTAAAGCAGTGCTTGATATCCCGTTTGCCTTTAAAAGAGTTGAAGCTATGCTATATAGAGCCAACTTTGATGCAGAAATTAACTACCTTAGAAAGTCTTTTCAAACCATGGAGGCTGCAAGTGATGAATTAAAGAACAGCCGCTTATTCCTCAAACTCCTTGAAGCTGTTCTGAGGACGGGAAACAGAATGAATGTTGGCACTAATCGAGGGGATGCTAAAGCTTTCAAACTGGAGACACTCCTAAAACTCGTAGATATAAAGGGAACAGATGGAAAGACCACGTTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAGGAGCAGAATCTGCAAATGAGAATGTGAAAATAGATTCCAAATTCAATGAGGATGAGTTTAAGAAGCAAGGATTGCAGGTTGTGGCAGGGCTCAGTAGAGATCTTAGTAATGTAAAAAAAGCAGCAGGAATGGATTCAGATGTCTTGAGCAGCTATCTTTCAAAGCTTGAAACAGGGCTTGATAAAGTGCGATTGGTTTTGCAATATGAAAAGCCAGAGGTGCATGGCAATTTCTTTAACTCCACAAAGCTATTCCTGAAATATGCTGAGGATGAAATTGTAAGGATTAAAGCGGATGAGAGAAAAGCTTTGTACCTTGTAAAAGAAGTTACAGAATACTTTCATGGGAATGCGGCAAAGGAAGAAGCTCACCCTCTCAGAATTTTCATGATTGTAAGAGACTTTCTGAGTATTTTGGATCTAGTGTGTAAAGAAGTGGAAAAGATGCATGATAGAATTGTTGGTGGTTCTGGCAGATCTTTCCGAATAGCTCCACATGCATCATTATCTGTTCTCAACAGGTACAACCATCCAAAGCAGGATAGAAGCTCAGATGAGGAAAGTTCATCCCCCTAG 2661 0.4806 MKARHLSFFYFCIIVLALFLSLSLSIPVNTAKGVNSSTSANESGTRRILHQPLFPASSAPPPPLPVEAPPSPEGGNIPFFHEYPAGPPPDQSQAAPSNSNTSIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKLVGSGNNNNNSHINIPNRNEVDSTVPPSSFLYIGTVEPTRASTNDSRDNRDVNKANRSPYHKLKRSDRYRPSPELQPMPPLSKPPDGNYPPAVSSSSESDEESRGTVFHSPQNSSVDGYYTPASRQSSLVNGSPAKRDVNSTPTPVVPFSKRTSPKSRVSAPSPEIRHVIIPSIKQPPPPSSPPPKHSRKPKFAAPPPPPNLKQLQSTTDTVSRGSKTSLNPPPPPPPPPPPPPPPPPPRKSVSPAVSASSNSASVKRHSWSPIECSLTKSSEEVEQSVSSSERLEANDRDGAKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNSAPKEPPRKSVLPSVDQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEINYLRKSFQTMEAASDELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAESANENVKIDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPEVHGNFFNSTKLFLKYAEDEIVRIKADERKALYLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLSILDLVCKEVEKMHDRIVGGSGRSFRIAPHASLSVLNRYNHPKQDRSSDEESSSP* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00499 886 MobiDBLite consensus disorder prediction 325 355 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 429 444 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 92 115 - -
Lapu2g00499 886 SUPERFAMILY Formin homology 2 domain (FH2 domain) 380 845 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 152 194 - -
Lapu2g00499 886 Pfam Formin Homology 2 Domain 444 834 IPR015425 -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 356 370 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 225 239 - -
Lapu2g00499 886 Gene3D Formin, FH2 domain 434 846 IPR042201 -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 55 72 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 151 444 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 195 223 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 241 312 - -
Lapu2g00499 886 ProSiteProfiles Formin homology-2 (FH2) domain profile. 439 860 IPR015425 -
Lapu2g00499 886 SMART it6_source 439 849 IPR015425 -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 52 115 - -
Lapu2g00499 886 PRINTS Proline rich extensin signature 217 229 - -
Lapu2g00499 886 PRINTS Proline rich extensin signature 295 316 - -
Lapu2g00499 886 PRINTS Proline rich extensin signature 370 395 - -
Lapu2g00499 886 PRINTS Proline rich extensin signature 231 247 - -
Lapu2g00499 886 PRINTS Proline rich extensin signature 324 340 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 396 428 - -
Lapu2g00499 886 MobiDBLite consensus disorder prediction 371 395 - -
Lapu2g00499 886 PANTHER FORMIN-RELATED 17 871 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00499 Lapu-Chr2 4222416 4227753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00499 421 876 FH2 protein (formin) Gene Family AT5G67470 71.957 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00499 - - gmx:100798670 1306.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00499 2 4222416 4227753 Lapu2g00499 2 4222416 4227753 ECH
Lapu2g00499 2 4222416 4227753 Lapu3g02159 3 41937390 41940768 PCT