Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00497 ATGGGGAGTTCTGGCACTTTTTCCTTGTCTAGCCTCATCTGTGAAGAAGGCGAAGCTTGCTTCTTTGAAGACCTAGATGAGACCCCTGATATTATTGACTCTCTTGATAGCCCATGTTTCATTTTGGAGGATGAAGAGGAATACATTGAGTATTTGTTCAGACAAGAAACGGGATTTGGATCCCAAAATCAACCATTTTTGGCCTCCGATGATCAATCTAACAGACACTGGTTGAGGAGTGCCCGTGTGGATGCCATTGACTGGATTTTCAATTCACAAGCAAAATTTGGGTTCAGAGTTGAGACTGCCTATATATCAGTGACTTACTTTGATCGGTTCCTTTCAAAGCGATCCATTGATGAATCAAAACCTTGGGCTATTCAGTTGTTATCTGTAGCATGTTTATCTCTGGCAGCAAAGATGGAAGAGCAGAATGTGCCAGTTCTATCTGATTATCCAATGGAAGAATATCGCTTTGAGAACAAAGTAATTAAGAACATGGAACTGATGATTTTGAGTACCTTGGAATGGAAAATGGGATCAACAACTCCTTTTGCTTATTTGCATTACTTTGTCGGCAAGTTCTGCCCTGGATCCAGACCACAAACAATAATCACAAAAGCCATTGGAAATATTGTGGCCATGGTCAAAGATGTTAATTTGATGGATCAACGACCATCCATAATTGCCTCGGCTGCCATATTCGCAGCTTTTGATGCCACATTAACAAGAAAAGCAATGGATCTTCGAATAAGTGCAATCTCATCGTGGGGAAATCTAGAAAGTGGAAATGTGTTTTTCTGTTACAATCTAATACAGGAAAAGAGGGAAAACAAAGTTAAGACGCCTTGCTCGAATTTAATGTCTACCCAGTCGAGCTCCGCGAGTGTTCTTGAGAACTCATCCGACACTTGTTCAGGAGCCAAGAGAAAACTTAGTTTTGAGCAGAGTGAAAATTGTGCAGCACAGAAGCTACATCGGCCTTAG 987 0.4113 MGSSGTFSLSSLICEEGEACFFEDLDETPDIIDSLDSPCFILEDEEEYIEYLFRQETGFGSQNQPFLASDDQSNRHWLRSARVDAIDWIFNSQAKFGFRVETAYISVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQNVPVLSDYPMEEYRFENKVIKNMELMILSTLEWKMGSTTPFAYLHYFVGKFCPGSRPQTIITKAIGNIVAMVKDVNLMDQRPSIIASAAIFAAFDATLTRKAMDLRISAISSWGNLESGNVFFCYNLIQEKRENKVKTPCSNLMSTQSSSASVLENSSDTCSGAKRKLSFEQSENCAAQKLHRP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00497 328 FunFam Cyclin-D5-1 77 180 - -
Lapu2g00497 328 PANTHER CYCLINS 45 280 IPR039361 -
Lapu2g00497 328 Pfam Cyclin, N-terminal domain 49 179 IPR006671 -
Lapu2g00497 328 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Lapu2g00497 328 SUPERFAMILY Cyclin-like 36 179 IPR036915 -
Lapu2g00497 328 Gene3D - 181 245 - -
Lapu2g00497 328 SMART cyclin_7 87 173 IPR013763 -
Lapu2g00497 328 CDD CYCLIN_AtCycD-like_rpt1 81 177 - -
Lapu2g00497 328 Gene3D - 77 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00497 Lapu-Chr2 4207994 4209429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00497 8 262 Core Cell Cycle Gene Families AT4G37630 34.831 1.26e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00497 K18811 - gmx:100798140 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00497 2 4207994 4209429 Lapu2g00497 2 4207994 4209429 ECH