Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00476 ATGCTTTCTGCTCTTCCCGCTTCCGATCCTCTGCAGGGAAACGCATTCCCCGCGTTGGACTTTGCTTTCACGCCCTGGGATGGGCCTGACTTTTTGCTCTTCAAGCCCACAAGCCCCAACCCCGTCGCCTCCAGTTCCGCTTCCGACGACCCCAACCCAACCCCTACCGACCAAAAACTGGCCTCCGACCACTCCAGCCGGGTTGTGTCCCTCATGGAGGAGCGAAAACGCAGGAGAATGATATCGAACCGGGATTCCGCCCGAAGGTCGCGCATGCGCAAACAGAGACACCTAGAAAACTTACGGAACCAGATGAACCTGTTTAGGGTTGAAAACCGGGAACTGAACAACGGGTTGCATTTCCTCCTTCACCACTCTAACCGTCTACGAACTGAAAACGAGTGGCTCCGGTCCGAACGAACCCTGCTCCGCCAAAAACTGGCCAACATAAATCAAATTTTGCTTTTCCAATTGCAACCTTTTTCCACTGCATGGCCCTGCAATATTGTCATGGCAGAATAA 522 0.5345 MLSALPASDPLQGNAFPALDFAFTPWDGPDFLLFKPTSPNPVASSSASDDPNPTPTDQKLASDHSSRVVSLMEERKRRRMISNRDSARRSRMRKQRHLENLRNQMNLFRVENRELNNGLHFLLHHSNRLRTENEWLRSERTLLRQKLANINQILLFQLQPFSTAWPCNIVMAE* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00476 173 MobiDBLite consensus disorder prediction 34 68 - -
Lapu2g00476 173 Coils Coil 84 118 - -
Lapu2g00476 173 Gene3D - 73 151 - -
Lapu2g00476 173 MobiDBLite consensus disorder prediction 38 65 - -
Lapu2g00476 173 Pfam bZIP transcription factor 75 133 IPR004827 GO:0003700|GO:0006355
Lapu2g00476 173 PANTHER BZIP TRANSCRIPTION FACTOR 44 38 157 - -
Lapu2g00476 173 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Lapu2g00476 173 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Lapu2g00476 173 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Lapu2g00476 173 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Lapu2g00476 173 MobiDBLite consensus disorder prediction 75 94 - -
Lapu2g00476 173 FunFam BZIP transcription factor 73 124 - -
Lapu2g00476 173 SUPERFAMILY Leucine zipper domain 75 125 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00476 Lapu-Chr2 4033320 4034428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00476 2 156 bZIP Transcription Factor Family AT3G49760 35.185 3.91e-26 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu2g00476 bZIP_1 7.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00476 - - gmx:102667230 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00476 2 4033320 4034428 Lapu3g01451 3 16666094 16667183 PCT