Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00475 ATGAAGCCTGCAGAAGATGGCGATATCGTTAACATAAACTATCAAAATAGCTGGTTAGGCTTCTCCCTCTCTCCACAAATGAATATAGTTGTTCCTTCACACTCTCATCAAGCACAGACTTCATCAGCTGCTGCTGAAACAGTTCCACCAACATATTACCACCACACACCTCTTCATACCTATGGACTCCAAGGTGAACATGTTGGAATGTATTCTTCCATGCCTATCATGCCCCTTAAATCCAATGTCTCGCTCTATGGAATAGAAGCTATGAGCAGATCACAAGCACAAGCGATGACAACTACTTCAGCAATACCTCTGAGTTTGGATAGTATGCTTTACAACCAACTCTTGTGTCATGGATCGAACGATCCAAATAACCAAAACCATGTGCAGGAGAGCATCTGCCAGCAACAATTATCATATTATTCTTCCTTAAGAAACCATGATGTGATTTTAGAAGGGTCTAAGCACCAACTCCCTTGTATAGGTGAGGATGAAGTTGCTTGTCTCAAAAGTTGGTTCTCAAGGGACTTTCCTGCTTGTCATGCACAGGAGTCAAAGATGTTTGTTCCTTTGGAGGATAATGGAAGCAAATCTGGATCCACTGGATCAGTAACATATGGGGATTTACATTCATTGAATTTGTCTGCGAGCCCTACTACACGATCAAGCTGTGTAACAGGTTCGCCTGCTATCACTGATACGAAGAAAAGGGGGATTGAAATGTTGGACCAGAATCAGAAGCAAATAGTTCATAGGAAATCCATAGACACCTTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGAAGGCAAGTTTATCTGGGGGGCTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGACATGGCCGCACTCAAGTATTGGGGACCCTCCTCTCATATAAATTTCCCATTGGAAAATTATCAAAAGGAACTTGAGGAAATGAAAAACATGACGAGACAAGAATATGTTGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGAGGAGCCTCCATGTATAGAGGAGTAACAAGCAGGCACCACCAACATGGAAGGTGGCAAGCTCGAATTGGGAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGCACCCAAGAGGAAGCAGCAGAAGCCTATGACATTGCTGCCATTAAATTCAGAGGAGTTAATGCTGTTACTAACTTTGATATAACAAGATATGACGTGGAAAAGATTATGGCAAGCGACAACCTTCTTAGCAGCGAACAAGCTAAGCGGAACAGAGAGAAGGAGGACGGAACAAGAAACGAGGCTTTTGTTAACCAAAATCCTTGTACATATGAACACACTAAAGAAACCATTGTAATGCAGAAAAGCTGCAAGATGGTTCCCTATCCATCCTCCCAACAGCTTGACCAGAATCCACCAAGAATTGAGAGTTGTAGAACTCATTCCTTCTCAACGGCTTTAGATGACATATATCATCAAGAAGTAGAGGAATCGAGTAACATGGGAACACACTTGTCAAATCCTTCTTCTCTGGTGACAAGTTTGAGTAGCTCAAGAGAAGAGAGCCCAGATAAGACAAGCTTGCCAGTACTCTTTGGAATGCCTTCAACAGTGTCTAAATTATTCACTAACATTCCAACAAGTGACGGGGATTCTTGGGAGCTATCGTCCAATCTCAGGCCAGCTCTTTCTTTGCCTCAGATGCCAATTTTTGCTTCCTGGACCGATGCATAG 1815 0.4275 MKPAEDGDIVNINYQNSWLGFSLSPQMNIVVPSHSHQAQTSSAAAETVPPTYYHHTPLHTYGLQGEHVGMYSSMPIMPLKSNVSLYGIEAMSRSQAQAMTTTSAIPLSLDSMLYNQLLCHGSNDPNNQNHVQESICQQQLSYYSSLRNHDVILEGSKHQLPCIGEDEVACLKSWFSRDFPACHAQESKMFVPLEDNGSKSGSTGSVTYGDLHSLNLSASPTTRSSCVTGSPAITDTKKRGIEMLDQNQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQGRKGRQVYLGGYDMEEKAARAYDMAALKYWGPSSHINFPLENYQKELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASDNLLSSEQAKRNREKEDGTRNEAFVNQNPCTYEHTKETIVMQKSCKMVPYPSSQQLDQNPPRIESCRTHSFSTALDDIYHQEVEESSNMGTHLSNPSSLVTSLSSSREESPDKTSLPVLFGMPSTVSKLFTNIPTSDGDSWELSSNLRPALSLPQMPIFASWTDA* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00475 604 MobiDBLite consensus disorder prediction 523 551 - -
Lapu2g00475 604 ProSiteProfiles AP2/ERF domain profile. 368 427 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 SUPERFAMILY DNA-binding domain 265 334 IPR016177 GO:0003677
Lapu2g00475 604 CDD AP2 367 429 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 ProSiteProfiles AP2/ERF domain profile. 266 332 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 FunFam AP2-like ethylene-responsive transcription factor 367 429 - -
Lapu2g00475 604 Pfam AP2 domain 266 324 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 Pfam AP2 domain 369 419 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 222 503 - -
Lapu2g00475 604 MobiDBLite consensus disorder prediction 523 557 - -
Lapu2g00475 604 PRINTS Ethylene responsive element binding protein signature 267 278 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 PRINTS Ethylene responsive element binding protein signature 409 429 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 CDD AP2 265 332 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 Gene3D AP2/ERF domain 265 334 IPR036955 GO:0003700|GO:0006355
Lapu2g00475 604 Gene3D AP2/ERF domain 368 429 IPR036955 GO:0003700|GO:0006355
Lapu2g00475 604 SMART rav1_2 368 433 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 SMART rav1_2 266 338 IPR001471 GO:0003700|GO:0006355
Lapu2g00475 604 FunFam AP2-like ethylene-responsive transcription factor ANT 265 334 - -
Lapu2g00475 604 SUPERFAMILY DNA-binding domain 367 428 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00475 Lapu-Chr2 4012467 4016155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00475 1 464 AP2-EREBP Transcription Factor Family AT4G37750 48.780 6.31e-142 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lapu2g00475 AP2 5.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00475 K09285 - gmx:100794433 958.362