Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00462 ATGCCGCAGCCATTGTTTCTTTTGCTTTTATGTACATTGTGTTCAAGTGGTTTATCCCAAACGGTGTCCCTCCAAAGAGAGTCTCGAATTCTACTTCGGGTTAAGGACACCCAGCTTGAAGACAAAAACAAGAGTCTCCAAAACTGGGCACCAAACACAGACCATAACCCCTGCAACTGGACCGGCATTACATGCGACGCACAAAACCAATCAGTTGTCTCCATTGACCTCTCCGAAACTGGAATCTACGGCGAGTTCCCCTTCGGTTTTTGTCGCATTCACACACTCCAAAACCTTTCTCTCGCATTCAATTTTCTCTCCGACTCTGTCTCCCCTAACTCCCTGCTCCTCTGTTCCCACCTCCGTCTCTTAAACCTCTCGGACAATGTCTTCGTTGGAGACCTGCCGGCATTCCTGCCAGAGTTCACCGAACTAAGAGTATTAGATCTCTCGGCGAACAACTTCACTGGCGACATTCCGACGAGTTTTGGACAGATTCCACGTCTGAGAGTGCTCATTTTATCGGGAAACCTTCTTAGCGGAACAATCCCTCCCTCTTTAGGCAACCTCAGTGAGTTAACTCATTTGGGATTAGCCTATAACCCCTTCAAACCAGGACCGTTACCTCCCCAACTAGGAAAGCTCTCTAGTCTCGAAACACTGTTCCTCGCCGGTGTTAACCTCGTAGGGGAAATTCCACCCTCTATCGGGAACCTCACATCGCTCAAAAACTTGGATTTATCTCGAAACTCTTTGTCCGGTAACATCCCAAACAGCATTTCAGGTCTGAAAAACGTTGAACAAATTGAACTATTTGAAAATCAGCTTTCCGGTGAATTGCCCCAAAGTTTAGGAAACCTCAGTAGTTTAATTCTCTTGGACCTCTCTCAGAACGCTCTCACGGGGAAACTACCACACGCAATCGCTTCTTTGCGTCTCTATTCTCTCAACCTGAATGACAACCTTCTCGGGGGGGAAATTCCTGAAAGTTTAGCTTCAAACCCCAACCTGCAGCAGCTGAAACTCTTCAACAACAGCTTCACCGGGAAACTCCCACAAGATCTGGGACAAAACTCAGAGATACAGGAATTGGATGTCTCAACGAATGACTTCGTAGGGGAGTTGCCAAAGTACCTCTGCAAGAGAAACAAGCTCGAGCATCTCATCACGTTCGCGAATCGCTTCTCGGGAACGCTCCCCAAGCAATACGGAGATTGTGATTCCCTTCAGTATGTCAGAATCCAGAACAACCAGTTATCAGGCCAGGTGCCGCCATCGTTTTGGGGCCTTACTGGGCTTCAGTTTCTGGAAATGTCCAACAACAGGTTCCAAGGCTCTGTCTCTGCTTCCATCTCTACGGCACTCACCAAACTCATTTTGTCTGCTAATGCTTTTTCTGGCAAATTCCCAACGCGAATCTGCCAACTCCCTCACCTTCTGGAGATTGACGTCAGCAAGAACCGCTTCACCGGTGAAGTTCCCACGTGCTTAACTGGGTTGAAAAAGTTACAGAAACTTAGGATGCAAGAAAACATGTTCACCGGCGAGATTCCCAGTAATGTGGCCCTCTGGACTGACATGACAGTGTTGAACCTGTCGTTTAACCGATTCTCCGGTTCAATCCCGCAGGAACTTGGCAGTTTACAGTATTTGACATACCTTGATCTCGCCGTTAATTCTTTAACGGGGGAGATCCCGGTGGAGTTGACGAACCTCAGACTCAACCAGTTCAACGTCTCTGATAACAATCTTCACGGGGAAGTTCCTTCAGGTTTCAACCACCAAGTGTACTTGTCCGGTCTAGAGGGAAACCCGGGTCTGTGCAGCGCCGTAATCAAAACCCTACCTCCTTGTTCAAAACGCAGGCCATTTTCTGTACTTGCGATTGTCGTTTTAATTGCCTGCGTTTCGCTCCTTGTGGGGTCCATGTTGTGCTTCCTGAACAGCAAGACGCGCGGCAAATCCAAGCGCTCGTATATGTCAACCGCGTTTCAGAGAGTGGGGTTCAATGAAGAAGACATTGTTTCGAACTTAACCGGGGAGAACGTGATTGGGGCAGGGAGTTCGGGTCGGGTCTATAGGGTGAGGCTGAAGACGGGGCAGACGGTGGCAGTGAAAAAGCTGTTCGGCGGTGCGCATAAGCCTGAGACGGAATTGGTGTTCAGGGCGGAGATTGAGACGTTGGGTAGGATCCGGCATGCGAATATAGTGAAACTGTTGTTTTGTTGCAGTGGTGATGAGTTTAGGGTATTGGTGTTTGAGTACATGGAGAATGGGAGCTTAGGGGATGTGTTGCATGGTGAGGACAGGTGTGGGGAGTTGGTGGAGTGGTCTAAAAGGTTCGCAATTGCGGTGGGTGCGGCTCAGGGGCTGGCTTATTTGCACCATGATTGTGTGCCGCCAATTCTTCACAGGGACGTCAAGAGTAACAACATTTTGCTGGACCATGAGTTTGTGCCAAGAGTAGCGGACTTTGGCCTCGCTAAGACATTGCAGCGTGAGACATCCCAGGCTGCTGCTATGTCCAGGGTTGCTGGATCATATGGCTACATTGCTCCAGAGTATGCTTATACAATGAAAGTGACCGAGAAGAGCGATGTGTATAGTTTTGGGGTTGTGCTGATGGAATTGATCACCGGGAAGAGGCCAAATGACACTTCTTTTGGGGAGAACAAGGATCTAGTGAAATGGATCACTGAGACTGTTTTATCAGCAACTCCTGAAAGAGGAAGTGCCAATATGGGAGGAGGTAAAGATTATATTATGACCAAGATTGTGGACCCAAGATTGAACCCAGCCACTTGTGATTATGATGAGGTTGAGAAGGTTTTAAATGTGGCCCTACTCTGCACCTCGGCATTTCCCATTAATAGACCCTCGATGAGAAGGGTGGTTGAATTGCTCAAGGACCATAAACTGCCATGA 2925 0.4838 MPQPLFLLLLCTLCSSGLSQTVSLQRESRILLRVKDTQLEDKNKSLQNWAPNTDHNPCNWTGITCDAQNQSVVSIDLSETGIYGEFPFGFCRIHTLQNLSLAFNFLSDSVSPNSLLLCSHLRLLNLSDNVFVGDLPAFLPEFTELRVLDLSANNFTGDIPTSFGQIPRLRVLILSGNLLSGTIPPSLGNLSELTHLGLAYNPFKPGPLPPQLGKLSSLETLFLAGVNLVGEIPPSIGNLTSLKNLDLSRNSLSGNIPNSISGLKNVEQIELFENQLSGELPQSLGNLSSLILLDLSQNALTGKLPHAIASLRLYSLNLNDNLLGGEIPESLASNPNLQQLKLFNNSFTGKLPQDLGQNSEIQELDVSTNDFVGELPKYLCKRNKLEHLITFANRFSGTLPKQYGDCDSLQYVRIQNNQLSGQVPPSFWGLTGLQFLEMSNNRFQGSVSASISTALTKLILSANAFSGKFPTRICQLPHLLEIDVSKNRFTGEVPTCLTGLKKLQKLRMQENMFTGEIPSNVALWTDMTVLNLSFNRFSGSIPQELGSLQYLTYLDLAVNSLTGEIPVELTNLRLNQFNVSDNNLHGEVPSGFNHQVYLSGLEGNPGLCSAVIKTLPPCSKRRPFSVLAIVVLIACVSLLVGSMLCFLNSKTRGKSKRSYMSTAFQRVGFNEEDIVSNLTGENVIGAGSSGRVYRVRLKTGQTVAVKKLFGGAHKPETELVFRAEIETLGRIRHANIVKLLFCCSGDEFRVLVFEYMENGSLGDVLHGEDRCGELVEWSKRFAIAVGAAQGLAYLHHDCVPPILHRDVKSNNILLDHEFVPRVADFGLAKTLQRETSQAAAMSRVAGSYGYIAPEYAYTMKVTEKSDVYSFGVVLMELITGKRPNDTSFGENKDLVKWITETVLSATPERGSANMGGGKDYIMTKIVDPRLNPATCDYDEVEKVLNVALLCTSAFPINRPSMRRVVELLKDHKLP* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00462 974 SUPERFAMILY Protein kinase-like (PK-like) 669 968 IPR011009 -
Lapu2g00462 974 FunFam Leucine-rich receptor-like protein kinase family protein 208 306 - -
Lapu2g00462 974 ProSiteProfiles Protein kinase domain profile. 678 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00462 974 Pfam Protein kinase domain 681 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00462 974 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 24 190 - -
Lapu2g00462 974 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Lapu2g00462 974 FunFam Leucine-rich repeat receptor-like protein kinase 756 973 - -
Lapu2g00462 974 SUPERFAMILY RNI-like 74 422 - -
Lapu2g00462 974 Gene3D Ribonuclease Inhibitor 292 621 IPR032675 -
Lapu2g00462 974 Gene3D Transferase(Phosphotransferase) domain 1 756 973 - -
Lapu2g00462 974 Gene3D Phosphorylase Kinase; domain 1 652 755 - -
Lapu2g00462 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Lapu2g00462 974 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 654 755 - -
Lapu2g00462 974 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Lapu2g00462 974 Pfam Leucine rich repeat 217 276 IPR001611 GO:0005515
Lapu2g00462 974 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Lapu2g00462 974 SUPERFAMILY RNI-like 350 608 - -
Lapu2g00462 974 PRINTS Leucine-rich repeat signature 242 255 - -
Lapu2g00462 974 PRINTS Leucine-rich repeat signature 287 300 - -
Lapu2g00462 974 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 193 969 - -
Lapu2g00462 974 SMART serkin_6 678 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00462 974 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Lapu2g00462 974 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Lapu2g00462 974 FunFam Leucine-rich repeat receptor-like protein kinase TDR 308 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00462 Lapu-Chr2 3871271 3874603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00462 22 972 Receptor kinase-like Gene Family AT5G65710 56.540 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu2g00462 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00462 - - gmx:100813889 1584.7