Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00461 ATGCGGCTCCTCTTTCTCTTTCTGTTTCTGTTTTTCCATTTTCTCCATTTTCCACAAACCCTTTCCACGCCATTCTCAGACCACACCGCCCTTCTCTCTCTCCGTTCAGCCATCACCGATGCCACCCCACCCGTTCTCTCTTCCTGGAACGCCTCCACCTCTCACTGTTCCTGGCTCGGCGTCACCTGCGACGCCCACCGCCACGTCATCGCTCTCGACCTCACCGGACTCGACCTCACCGGCACTCTCTCCGCCGACGTTGCTCACCTCCCATTCCTCTCCAATCTCTCCCTCGCTGCCAATAAGTTCTCCGGCCCCATTCCTCCCTCTCTCTCCTCTCTCTCTGCCCTCCGCCTCCTCAACCTCTCCAACAATGGCTTCAACCAAACCTTCCCTCCGGAGCTCTCGCGCCTCCAGAGCCTCGAGGTCCTCGACCTCTACAACAACAACATGACCGGCGCGCTCCCTCTCGCCGTCTCTCAGATGCTCAACCTTCGCCACTTGCATCTCGGCGGGAACTTCTTCTCCGGCCAGATCCCGCCGGAGTATGGACGGTGGCCGCGCCTCGAGTACCTCGCCATCTCCGGAAACGAGCTCGACGGGACAATACCGCCGGAGATCGGGAACCTCACCAGCCTCCGGGAGCTCTACATCGGCTACTACAACGCCTACGTGGGCGGCATTCCGCCGGAGATCGGAAACTTGTCAGAGCTGGTGAGGCTGGACGCCGCGAACTGTGGTTTGACCGGCGAGATTACGGCGGCGCTGGGTAAGCTGCAGAAGCTGGACACGCTGTTCCTTCAGGTGAATGCGCTGTCAGGGCCTCTTACGCCGGAGCTGGGGAACCTGAAGAGACTGAAATCGATGGATTTGTCTAACAACATGCTCTCCGGTGAGATTCCAGCGAGTTTCGGCGAGCTGAAGAACATTACCCTTCTGAACCTATTTAGGAACAAGCTTCACGGAGCAATACCGGAGTTCGTAGGGGAGCTTCCGGCGTTGGAAGTGGTGCAACTTTGGGAAAACAACTTCACAGGTAGCATTCCTGAGGGTTTAGGTAAGAACGGGAGACTGAGCGTTGTCGATCTTTCTTCTAACAAACTTACTGGGACTTTGCCTCCTTACCTCTGTTCTGGGAACACTCTTCAGACTTTAATAACTCTCGAGAATTTCTTGTTTGGTCCAATTCCGGAAGCGCTTGGGAGTTGTGAATCCCTCGCTCGGATTCGAATGGGAGAGAACTTTCTGAATGGGTCCATTCCGAAAGGGCTTTTTGGACTTCCCAAACTCATCCAGGTTGAGCTTCAGGATAATTATCTCTCTGGAGAGTTTCCTGAGGCGCGTTCTATAGCTGTTAATCTTGGTCAGATTACTCTCTCTAACAACCAGCTTTCAGGGGCTTTGCCTCCTTCCATTGGTAACTTCACCAGCGTGCAGAAGCTCCTTCTTGACGGTAACATGTTTTCGGGTCGGATCCCTCCACAGATTGGGAGGTTGCAACAGCTCTCAAAGATTGACTTTAGTGGCAACAAGTTCTCGGGTCCTATTGCACCTGAGATCAGTCAGTGTAAGTTGTTAACTTTCCTGGACCTTAGCCGCAACGAGCTCTCCGGAGAGATCCCAAATGAGGTTACTGGAATGAGGATATTGAATTACCTTAATCTCTCAACTAATCATTTAGTTGGTAGCATTCCCTCTTCAATATCCTCGATGCAAAGCTTAACTTCTGTTGATTTTTCGTACAACAATCTGTCTGGTTTGGTGCCCGGTACTGGTCAATTCAGCTACTTCAACTACACGTCTTTTTTGGGGAACCCTGACCTTTGTGGCCCCTATTTAGGTGCTTGCAAGGATGGGGTTGCCAATGGTGCACACCAACCTCATGCTAAAGGACTCTCGTCTTCTTTGAAGCTTCTACTTGTTGTTGGGTTGCTTTTATGTTCCATTGCTTTTGCTGTGGCGGCAATACTCAAGGCTCGTTCACTGAAGAAGGCCAGTGAGGCTCGTGCATGGAAGTTGACTGCGTTCCAACGTTTGGACTTCACTGTTGATGATGTTTTGCATTGCTTGAAGGAGGATAATATTATAGGCAAAGGAGGTGCAGGCATTGTCTACAAAGGGGCTATGCCTAACGGGGATCATGTTGCTGTGAAAAGGCTTCCGGCTATGAGTAGAGGCTCTTCCCACGACCATGGGTTCAGCGCGGAGATTCAGACACTGGGGCGAATCCGACATAGGCACATTGTTAGATTGTTGGGATTCTGTTCAAATCATGAGACTAACCTTTTGGTCTATGAGTACATGCCTAATGGAAGCTTAGGTGAGGTTCTTCATGGAAAGAAGGGGGGTCATTTGCATTGGGACATAAGGTATAAAATTGCGGTGGAGGCTGCCAAAGGGCTTTGCTATCTGCACCATGATTGTTCTCCGCTCATTGTTCACCGTGATGTGAAGTCAAACAACATCCTTCTTGATTCTAATCATGAAGCCCATGTTGCTGATTTTGGGCTTGCCAAGTTCCTGCAAGATTCAGGGACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAATATGCCTACACATTGAAAGTTGATGAGAAAAGCGATGTGTACAGTTTTGGCGTGGTTCTTTTAGAACTTATAACAGGCAGGAAACCAGTTGGGGAATTTGGTGACGGTGTGGACATTGTGCAATGGGCAAGGAAAATGACGGACTCTAACATGGAAGAAGTTCTTAAAGTTCTTGATCCTAGACTTCCGTCAGTTCCCCTCCACGAAGTGATGCATGTTTTCTATGTAGCCATGCTATGTGTTGAAGAACAGGCTGTAGAGAGGCCAACTATGCGTGAAGTTGTCCAAATACTGACAGAGCTTCCAAAGCCACCTGGTTCTAAACAGGAAGACTTAACAGAATCCTCTTTGTCATCATCAAATGCTTTAGAATCTCCGTCCACAGCCTCCAAAGATCATCAAAATCCTCCTCAATCCCCACCACCCGACCTTCTTAGCATTTGA 3033 0.4998 MRLLFLFLFLFFHFLHFPQTLSTPFSDHTALLSLRSAITDATPPVLSSWNASTSHCSWLGVTCDAHRHVIALDLTGLDLTGTLSADVAHLPFLSNLSLAANKFSGPIPPSLSSLSALRLLNLSNNGFNQTFPPELSRLQSLEVLDLYNNNMTGALPLAVSQMLNLRHLHLGGNFFSGQIPPEYGRWPRLEYLAISGNELDGTIPPEIGNLTSLRELYIGYYNAYVGGIPPEIGNLSELVRLDAANCGLTGEITAALGKLQKLDTLFLQVNALSGPLTPELGNLKRLKSMDLSNNMLSGEIPASFGELKNITLLNLFRNKLHGAIPEFVGELPALEVVQLWENNFTGSIPEGLGKNGRLSVVDLSSNKLTGTLPPYLCSGNTLQTLITLENFLFGPIPEALGSCESLARIRMGENFLNGSIPKGLFGLPKLIQVELQDNYLSGEFPEARSIAVNLGQITLSNNQLSGALPPSIGNFTSVQKLLLDGNMFSGRIPPQIGRLQQLSKIDFSGNKFSGPIAPEISQCKLLTFLDLSRNELSGEIPNEVTGMRILNYLNLSTNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVANGAHQPHAKGLSSSLKLLLVVGLLLCSIAFAVAAILKARSLKKASEARAWKLTAFQRLDFTVDDVLHCLKEDNIIGKGGAGIVYKGAMPNGDHVAVKRLPAMSRGSSHDHGFSAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDIRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWARKMTDSNMEEVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKQEDLTESSLSSSNALESPSTASKDHQNPPQSPPPDLLSI* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00461 1010 Pfam Protein tyrosine and serine/threonine kinase 692 961 IPR001245 GO:0004672|GO:0006468
Lapu2g00461 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 84 327 - -
Lapu2g00461 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Lapu2g00461 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 659 767 - -
Lapu2g00461 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 335 620 - -
Lapu2g00461 1010 Gene3D Ribonuclease Inhibitor 21 87 IPR032675 -
Lapu2g00461 1010 Gene3D Ribonuclease Inhibitor 88 355 IPR032675 -
Lapu2g00461 1010 Gene3D Ribonuclease Inhibitor 356 620 IPR032675 -
Lapu2g00461 1010 SUPERFAMILY L domain-like 355 613 - -
Lapu2g00461 1010 SMART serkin_6 690 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00461 1010 ProSiteProfiles Protein kinase domain profile. 690 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00461 1010 SUPERFAMILY RNI-like 72 392 - -
Lapu2g00461 1010 MobiDBLite consensus disorder prediction 972 997 - -
Lapu2g00461 1010 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 164 956 - -
Lapu2g00461 1010 Gene3D Phosphorylase Kinase; domain 1 656 767 - -
Lapu2g00461 1010 SUPERFAMILY Protein kinase-like (PK-like) 688 977 IPR011009 -
Lapu2g00461 1010 SMART LRR_typ_2 571 594 IPR003591 -
Lapu2g00461 1010 SMART LRR_typ_2 283 307 IPR003591 -
Lapu2g00461 1010 SMART LRR_typ_2 114 138 IPR003591 -
Lapu2g00461 1010 SMART LRR_typ_2 331 355 IPR003591 -
Lapu2g00461 1010 SMART LRR_typ_2 356 379 IPR003591 -
Lapu2g00461 1010 SMART LRR_typ_2 162 186 IPR003591 -
Lapu2g00461 1010 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Lapu2g00461 1010 MobiDBLite consensus disorder prediction 964 1010 - -
Lapu2g00461 1010 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 768 978 - -
Lapu2g00461 1010 Gene3D Transferase(Phosphotransferase) domain 1 768 984 - -
Lapu2g00461 1010 Pfam Leucine Rich Repeat 285 307 IPR001611 GO:0005515
Lapu2g00461 1010 Pfam Leucine Rich Repeat 164 180 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00461 Lapu-Chr2 3850798 3855537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00461 20 989 Receptor kinase-like Gene Family AT5G65700 80.122 0.0 1576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu2g00461 PK_Tyr_Ser-Thr 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00461 - - gmx:548032 1806.57