Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00459 ATGGACAAGGCTTCAGTGCTGGGAGACGCTATCAGGTACGTGAAAGAGCTCCAAGAGCGTCTGAAAATGCTTGAAGAAGAGAACAAGGACAGAGACGTGGAGTCTGTGGTAAAGGTGAGGAAGCCATGGCTGAGCAGTGACGATGGTTCAACTTCACCTGATGAAGATGGATGTGGTAGGGAAAGTCTCCCTCGCGTTGAAGCACGAGTGTCAGAGAAGGATGTGCTCCTTCGCATCCATTGCCAAAAGCAAAAGGGCCTTTTGCTCAAAATACTTGTGGAGATTCAGAACCTTCATCTCTTCGTTGTCAATAGCAGTGTCCTACCTTTCGGAGACTCCATACTCGACATTACCATTGTTGCTCAGATGGGGACCGAGTACAAGTTGACCATAAATGATCTTGTGAAGAACCTACGCATGGCTACTTTGAAATCCATGTCGTAA 444 0.473 MDKASVLGDAIRYVKELQERLKMLEEENKDRDVESVVKVRKPWLSSDDGSTSPDEDGCGRESLPRVEARVSEKDVLLRIHCQKQKGLLLKILVEIQNLHLFVVNSSVLPFGDSILDITIVAQMGTEYKLTINDLVKNLRMATLKSMS* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00459 147 Coils Coil 7 34 - -
Lapu2g00459 147 Gene3D - 1 39 IPR036638 GO:0046983
Lapu2g00459 147 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 29 IPR036638 GO:0046983
Lapu2g00459 147 MobiDBLite consensus disorder prediction 43 62 - -
Lapu2g00459 147 PANTHER BHLH TRANSCRIPTION FACTOR 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00459 Lapu-Chr2 3832888 3833623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00459 1 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 50.694 2.00e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00459 - - gmx:100816551 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00459 2 3832888 3833623 Lapu2g00459 2 3832888 3833623 ECH
Lapu2g00459 2 3832888 3833623 Lapu3g01429 3 16296791 16298740 PCT