Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00458 ATGGACGCATCAGAACTCAGCTGGTTATCTGATTTGCTGTTGCAGGAAACGGAGGATTTTAACTTGTTCCAACAATGTCAGCTAGAGTTGCTCGAAGATGATGAAGAGTTACTTTCTCTCGAGATAGCAAGTGCCCTGGAGAATTTGCCGCAGCAGCAACCTTTGTCTTCGGAGAGTCACACATCGTATTCGGAAACCCTGATGAACTCCTTCACGGATGAAACCAGTAATTTGGACAGGCCCTCCAAGCAGCTCAAAACCAATTTCTCCAGTTGGAACTCGTCCCCCATCACCACCAAACACTTTTCGCCCAATCTTTCCTCCTCTTCCTCTCCTTCTTCTCCAACCTCCCAGATTATGTGTCTGGACAACTCAAACTCGTTTCCTTTCCAGAGCACTCACTTCCATGGGATTGTTTCTGCTGCCCCGAACCCGCCGCAACAGAACAAAGGGGTTTCAGTTTCACCCCTAGAGACCCGAAAAGGATCGTCACAAAACCAGAACTTTGAAACCGAAAGCCCCCAAGGCCAAGAAAGCTGCAAGACTTCCCGTCACGGTCGGGATCACATCATCGCCGAGAGAAAACGGAGAGAGAAGCTCAGTCAAAGCTTAATAGCTCTAGCTGCTCTCATTCCAGGTTTAAAGAAGGTACTGTTCACCATAAACAACTGA 672 0.4807 MDASELSWLSDLLLQETEDFNLFQQCQLELLEDDEELLSLEIASALENLPQQQPLSSESHTSYSETLMNSFTDETSNLDRPSKQLKTNFSSWNSSPITTKHFSPNLSSSSSPSSPTSQIMCLDNSNSFPFQSTHFHGIVSAAPNPPQQNKGVSVSPLETRKGSSQNQNFETESPQGQESCKTSRHGRDHIIAERKRREKLSQSLIALAALIPGLKKVLFTINN* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00458 223 MobiDBLite consensus disorder prediction 137 180 - -
Lapu2g00458 223 MobiDBLite consensus disorder prediction 137 187 - -
Lapu2g00458 223 Gene3D - 175 219 IPR036638 GO:0046983
Lapu2g00458 223 MobiDBLite consensus disorder prediction 101 120 - -
Lapu2g00458 223 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 215 IPR036638 GO:0046983
Lapu2g00458 223 Coils Coil 28 48 - -
Lapu2g00458 223 PANTHER BHLH TRANSCRIPTION FACTOR 51 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00458 Lapu-Chr2 3830751 3831990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00458 79 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 32.432 4.53e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00458 - - vun:114174269 222.631