Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00445 ATGGGAAGCAATGGACTATGCAGTCTCTTTTCTTGCTTCAAAGCTTCTTCCAATCACAACCATGGCCATGGCCATGGCCATAACCATAACCAGAACCAGTTGGTTTTTGCGGAGACGGAGCCATTGGACGAAACCCTAGGCCACTCTTTCTGCTACGTTAGATCCTCCGCGCGCTTTCTCTCTCCCTCCCATTCCGATCGCATCCTCTCTCCCTCCAACTCTCTCCGCTTCTCCCCCTCTCATCGCTCTGATTTCCCTGAAACCGCATTCAAAGCCATTTCCGGTGCCTCTGTCAGTGCCAACAGTTCCGTCCCCAAAACTGTTCTCCAGTCTGAGGACGAGGACATCACACTCAATGGCTTCAAAGGAACAGCGTCCTTCAGCGCTCTTCCTCTCCAGCCAGCGCCCAGAGGAGGAGAAACTGTTCCCTCGGAGAGAGAGCGGAGAGCGTTCTTTCTCTCGGGGCCAATTGAGAGCGGCGCGCTCTCAGGACCCCTCGACGACTCCGTTTCGAGCTCCGCCGGAGTGCCTTTCTCTGCTCCGCTTGGAGGTGGAGTGTATGTGAAGAAGAAGCGGAAGAAGAGCATTGCCGGGTTGAGAAAAGCCTTCCAGAGGAGTCTCTCGGAGAAGAAGCGGCCCTGGGTGGTACCGGTGGGGCGGAAGGGGAAGACGGAAGCAACCAGCGAGACGGAGAACGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCCGGGGAGGATCGTGTGCATGTGGTTGTATCGGAAGAACAGGGATGGTTGTTCGTAGGGATATACGACGGTTTTAATGGCCCTGATGCGCCAGAGTTTCTCATGGGTAATCTTTACCGTGCTCTCCACAAAGAGCTTCAGGGTTTGTTTTGGGAGCTTGAAGAACCTCAGTCGCAGGTACAGGGAACTAACCCTGCACCTGAGATGGAGGATAATGAAACTGAACCCCGGAATGAGGGGGAGGTGGAGGAGGACTCTAATTCTCTCCGAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGGACTGAGAGTAGGAGGAGAAGGTTGTGGGAGTTTCTGGCTGAGGAGGATGATGCTGAGAACGGGCTCGATCTTTCCGGGTCTGATAGGTTTGCGTTTTCGGTTGATGATGCACTCAGTGCTAGCAAGGAGGGTTCGGGAGGTAGTAGACGGTGGTTGATTTTGTCTAAGTTGAAGCATGGGTTGTCGAGGCATAAGGAGGGTCATGGGAGGAGGTTGTTGCCGTGGCGCATGGGCGTGGGGGAGGAGGAGAAGGAGAGGGTTGAGGTGGAAAATCCCACAACAGCAGAGGAGGAGGAGGAGGAAAAGGGTCACGGTGGGAGGAAGAGGAAAGTGGGGCCTGTGGATCATGAGTTGGTTTTGAGGGCGTTGTCTAGGGCGCTTGAGATGACTGAGCTTGCTTATTTGGATATGACGGATAAGCTGATTGATACCAACCCGGAGCTTGCTCTGATGGGGTCGTGTCTGTTGGCTGTGTTGATGAGGGATGAGGATGTTTATGTTATGAACGTGGGCGATAGCCGCGCCATTGTGGCACATTATGAGTGTGAAGAGGTTCATGGTACTAGTAAGGAAACGGGAAGTGGATGCATTGGGTCAAGCGGGGAGTGCATAGTGGAGGAGTCGTCGGCTCCAGCCGAAGGTGGTGACGTGTTAGGGAATGAGGGTCCTGCTCGGGAAAGGAGGTTGGTTGCATTGCAGCTGTCCACTGATCACAGCACCAGCATTGAAGAGGAAGTTGTTAGAATTAAGAATGAGCATCCTGATGATACCCAATGTATTGTAAATGATAGAGTGAAAGGCCGTCTCAAGGTTACTAGAGCTTTTGGTGCTGGATTTTTGAAACAGCCAAAGTGGAACGATGTGGTGCTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATGTATCCTGCTGCCCTTCATTACGTCACCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCTTCTGATGGTTTGTATCAATACCTAAGCAATCAAGAAGTGGTTGCTCAGGTCGAGAGCTTCATGGAAAAGTTTCCGGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCTTACGTGCAGCCAAAAAGGCTGGAATGGATTTCCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTATCATGATGATGTGACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCAGGGAAGTATCCGTGA 2268 0.5172 MGSNGLCSLFSCFKASSNHNHGHGHGHNHNQNQLVFAETEPLDETLGHSFCYVRSSARFLSPSHSDRILSPSNSLRFSPSHRSDFPETAFKAISGASVSANSSVPKTVLQSEDEDITLNGFKGTASFSALPLQPAPRGGETVPSERERRAFFLSGPIESGALSGPLDDSVSSSAGVPFSAPLGGGVYVKKKRKKSIAGLRKAFQRSLSEKKRPWVVPVGRKGKTEATSETENESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEEPQSQVQGTNPAPEMEDNETEPRNEGEVEEDSNSLRGSVKRVTFQAEGTESRRRRLWEFLAEEDDAENGLDLSGSDRFAFSVDDALSASKEGSGGSRRWLILSKLKHGLSRHKEGHGRRLLPWRMGVGEEEKERVEVENPTTAEEEEEEKGHGGRKRKVGPVDHELVLRALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAHYECEEVHGTSKETGSGCIGSSGECIVEESSAPAEGGDVLGNEGPARERRLVALQLSTDHSTSIEEEVVRIKNEHPDDTQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYVSCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVAQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00445 755 Pfam Protein phosphatase 2C 576 711 IPR001932 -
Lapu2g00445 755 ProSiteProfiles PPM-type phosphatase domain profile. 226 743 IPR001932 -
Lapu2g00445 755 MobiDBLite consensus disorder prediction 426 454 - -
Lapu2g00445 755 Gene3D - 201 392 IPR036457 -
Lapu2g00445 755 PANTHER PROTEIN PHOSPHATASE 2C 221 742 IPR015655 GO:0004722|GO:0006470
Lapu2g00445 755 SUPERFAMILY PP2C-like 242 744 IPR036457 -
Lapu2g00445 755 CDD PP2Cc 447 743 IPR001932 -
Lapu2g00445 755 SMART PP2C_4 229 741 IPR001932 -
Lapu2g00445 755 Gene3D - 396 750 IPR036457 -
Lapu2g00445 755 MobiDBLite consensus disorder prediction 299 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00445 Lapu-Chr2 3726709 3732036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00445 1 754 PP2C-type Phosphatase Gene Family AT2G35350 56.151 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00445 - - gmx:100775371 1276.54