Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00402 ATGGCTACACCAGTTAATAATGGTCATTTTAAAGAAGAAAGATATGACTCATTGATGGAAAATGGGCATACTTTCCTCGTTAGGCAAGTGTATAAGCGGCGTAAAGTTTCAGCCATTCGTGATTTCCCAGATGGATGTGGACCATCTGCTTCGAGCATTGATCAAGTATCAAATATAAACACTGTAGGTTTTGGTTCTGTTAATGACACAATTGTCAAGGTTAAGAACAGTAAACATTTGGCGGGTGTTAAAACTTCCATCTGTGAAAATGATGGTCTGCATTCTGAGGTAAAAGATTTGCTTTCTACGGAGACTCTCAGCGTAACAGCTGACAGTGGTTTGGATAAGGACAACCCTGTGGTCTCATCTTATCACGTGGATGGATCCAGTGCTGAAGAAGAAGTGGGAATAGGGACTATTAGCCAAACCACTGATTGTGGTTTGAACAAGGAAAACACTGTAGCCTCATCACATAGAGTGGATGGATGTACTGCCGACCATGAATCTGCAAAAGTGACTCTTGGTCGAACAACTGATTGCAATTTGAATCAGGAAAACCCTGTGGTCTCATCTCATCAAGTTAATGAATCTACTCCGGAAGATAACGCTGCAAAAGTGACGCTTGGCCAAACAGACTGCAGTTTGAATCTGGAAAACCCTGAGGTCTCATCACATCAAGTGAATGGGTCTATTTCAGAAGATAAACTTGAAATAGTGACTGTTGACCGAACAACTGACTACGGTTTGAATAAGGAAAACCCTGTGGTCTCATCTCATCAAGTGGATGGCCCTACTTCAGAAGATAAACCTGCAAAAGTGCCTTTAGTGGACCAGGAAACTTTGAATACAGAGTTTTCAAGAACTGCAAACACTGTAGAATGTGACTCCTCTTATATGAAGTCATCTTCTCCAGCAGGTGAGATGGCTGTGCCCGGTGGTTCAAAGCACTTATTATCCAATGCTAATACATCTGCTTCCGGTGCTTGTATGGTGGAGCCTGTAACTAGAAGGTATCTTCCGCAAAGAAAAGTTTCAGCTGTTAGAGACTTCCCTCCTTCATGTGGACGTAATGCTCCATGTCTCGATAAGGACAAGCATGTGTGTCTAGGGAGGATCTCTTATTTGAATAACAAGACAGAGGGTCAACAGAACCTGGCTGTAGATGAAAATCCATTAAAAAAAGTAGCAGCTACTGATGTAAAAGAAGGTAAAAGTAACATTCAAGATGAATATGGTTGCAAGAGAAAGATTGTTGACATCAATCAAACTGATTCTGAAAGAAATGCTGCAGAGAAATTTAAAAAGCTGCATGCATGTGAACCAAAGTATGAGGTGAAAAAGTCACCAGAAAACGAGAGGGACAAGTATGCTACACACCCTGAAGCAAGTAATCATCATCAGGTCAAAATAAATTCTAAGGCAGTGGTAAAAGAGAAAAATAGGGACGAGACAAAGCCTTTGAGTATATCTCATTCTAAGCATAAGTTGAAAGGCAATTCTGAAAGATTGCAGGTCTCATCGGAGAGGAAAGTAATACTAGGTTTGATGGCTGATTCAGAATGTCCGTGGAGGTCTGATAAAGGTTCCTCCAAATTTAAGTTGGTTGGTAATAGTAAAGGTAAGAGAAAGAAAGGGGATTCTTTTGCATTGCCTGATAGGTATGAAATAGATATCAAGACTAGTGGTGCATTAAATGATTCTGAGAAGAAGCCTTTGAAAAAGAAAAAGGGAAAAGCTGCATCTGAAGGTATGGGTGAATTAGTACTTTGGGAAAAGGAGGATTGTCCTGATCCTAGTGAAAATAATGAAACTCTTCAAATTGTTCTGAGATCAAACGAGTTCGAAGTAAACATTACTCCCTCTTCTCATTCTAATTTCAGTGGTGATGATGAGAATGATCCAAATGTGACCCGAAAAAAAGTGAGGGAAACATTACGGTTGTTTCAAGTTGTTTGTAGAAAGCTCTTGCAGGAAGTAGAATCAAAGTTAAATGAGCGAGCAAATACTAAGAGAGTTGATTTAGCTGCTTCAAAGATCCTTAAGGAGAATGGGAAATATATCAACTCAGGCAAGCAAATACTAGGCTGTGTCCCTGGTGTTGAAGTTGGTGATGAATTTCAATATAGAGTGGAGCTTAATATAGTTGGCCTTCATCGTCCAATTCAAGGTGGCATAGATTATGTAAGACACAATGGTAAGGTCCTTGCAACCAGTATTGTTGCGTCTGGGGCCTATGCTGACGATTTGGATAACTCGGATGTATTGACATATACAGGGCAGGGTGGAAATGTGATGAACAGTGACAGAGAACCTGAAGATCAGAAGCTTGAGCGAGGCAATCTTGCTTTGATGAATAGTAGTGTTGAAAAGAATCCTGTTAGAGTAATTCGTGGCTCTGAATCAGTGGATGGAAAATGCAGGACTTATGTTTATGATGGACTGTATGTGGTTGAGTCAGCTTGGGAGGATGCGGGACCACATGGGAAGAAGATTTTTAAGTTTCGTCTGGTAAGAGAACCTGGTCAACCCGAGCTTCCTTTGAGAGAAGTGAAGAAATCTAAAAAGTTCAAAACTAGAGAAGGTGTATGTGTTACTGATATTTCTTTTGGAAAAGAACGAATTCCCATATGTGCTGTGAACACCATAGATGAAGAAAAACCTCCTCCGTTTAATTACATAACTAGCATGATATACCCCGAATTCCATCTCCTTCCTGCCGAAGGATGTGGTTGTCTTAATGGATGCTCAGATTTGGAGAAATGTTCGTGTGTAGTGAAAAATGGAGGAGAGATTCCATTCAATCACAACGAGGCTATTGTACAAGCAAAGCCTCTAGTCTATGAGTGTGGACCAACTTGTAAGTGTCCTTCAACGTGCCATAATAGAGTCAGCCAACTTGGCATAAAGTTTCAACTTGAAATATTTAAAACCAATACAAGGGGATGGGGTGTGAGATCCCTGAGTTCAATCCCTTCAGGGAGTTTTATCTGTGAATATATAGGAAAGCTTCTTGAGGAAAAGGAAGCTGAACAAAGGGCAGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTACAGCAACAGTTCTCTCTGGGATGGACTTTCGACTCTGATGCCGGAGGCACAGACAAGTTCCTGCGATGTTGTGCAGGATGGTGGTTTTACTATTGATGCTGCTGAGTTTGGCAATGTAGGGAGATTCATTAACCATAGTTGCTCCCCTAATATAATTGCTCAGAACGTCCTTTATGATCATCATGACACCAGAATGCCTCACATAATGTTCTTTGCTGCTGATAACATTCCTCCTTTGCAAGAGCTGACTTACGATTACAATTACGAATTAGATCAAGTCCGTGATTCTGATGGCAATATAAAAAGGAAGTATTGTTACTGTGGTTCTGCTGAATGTACCGGCAGGATGTATTGA 3432 0.4053 MATPVNNGHFKEERYDSLMENGHTFLVRQVYKRRKVSAIRDFPDGCGPSASSIDQVSNINTVGFGSVNDTIVKVKNSKHLAGVKTSICENDGLHSEVKDLLSTETLSVTADSGLDKDNPVVSSYHVDGSSAEEEVGIGTISQTTDCGLNKENTVASSHRVDGCTADHESAKVTLGRTTDCNLNQENPVVSSHQVNESTPEDNAAKVTLGQTDCSLNLENPEVSSHQVNGSISEDKLEIVTVDRTTDYGLNKENPVVSSHQVDGPTSEDKPAKVPLVDQETLNTEFSRTANTVECDSSYMKSSSPAGEMAVPGGSKHLLSNANTSASGACMVEPVTRRYLPQRKVSAVRDFPPSCGRNAPCLDKDKHVCLGRISYLNNKTEGQQNLAVDENPLKKVAATDVKEGKSNIQDEYGCKRKIVDINQTDSERNAAEKFKKLHACEPKYEVKKSPENERDKYATHPEASNHHQVKINSKAVVKEKNRDETKPLSISHSKHKLKGNSERLQVSSERKVILGLMADSECPWRSDKGSSKFKLVGNSKGKRKKGDSFALPDRYEIDIKTSGALNDSEKKPLKKKKGKAASEGMGELVLWEKEDCPDPSENNETLQIVLRSNEFEVNITPSSHSNFSGDDENDPNVTRKKVRETLRLFQVVCRKLLQEVESKLNERANTKRVDLAASKILKENGKYINSGKQILGCVPGVEVGDEFQYRVELNIVGLHRPIQGGIDYVRHNGKVLATSIVASGAYADDLDNSDVLTYTGQGGNVMNSDREPEDQKLERGNLALMNSSVEKNPVRVIRGSESVDGKCRTYVYDGLYVVESAWEDAGPHGKKIFKFRLVREPGQPELPLREVKKSKKFKTREGVCVTDISFGKERIPICAVNTIDEEKPPPFNYITSMIYPEFHLLPAEGCGCLNGCSDLEKCSCVVKNGGEIPFNHNEAIVQAKPLVYECGPTCKCPSTCHNRVSQLGIKFQLEIFKTNTRGWGVRSLSSIPSGSFICEYIGKLLEEKEAEQRAGNDEYLFDIGNNYSNSSLWDGLSTLMPEAQTSSCDVVQDGGFTIDAAEFGNVGRFINHSCSPNIIAQNVLYDHHDTRMPHIMFFAADNIPPLQELTYDYNYELDQVRDSDGNIKRKYCYCGSAECTGRMY* 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00402 1143 ProSiteProfiles SET domain profile. 970 1113 IPR001214 GO:0005515
Lapu2g00402 1143 ProSiteProfiles YDG domain profile. 695 838 IPR003105 -
Lapu2g00402 1143 ProSiteProfiles Post-SET domain profile. 1127 1143 IPR003616 -
Lapu2g00402 1143 ProSiteProfiles Pre-SET domain profile. 907 967 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g00402 1143 MobiDBLite consensus disorder prediction 445 462 - -
Lapu2g00402 1143 SMART set_7 970 1119 IPR001214 GO:0005515
Lapu2g00402 1143 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 429 1137 - -
Lapu2g00402 1143 MobiDBLite consensus disorder prediction 471 503 - -
Lapu2g00402 1143 Pfam Pre-SET motif 867 962 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g00402 1143 Pfam SAD/SRA domain 694 842 IPR003105 -
Lapu2g00402 1143 Gene3D SET domain 859 1143 IPR046341 -
Lapu2g00402 1143 MobiDBLite consensus disorder prediction 445 503 - -
Lapu2g00402 1143 MobiDBLite consensus disorder prediction 249 271 - -
Lapu2g00402 1143 SUPERFAMILY SET domain 854 1119 IPR046341 -
Lapu2g00402 1143 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 283 1143 IPR025794 GO:0016571
Lapu2g00402 1143 SMART preset_2 864 954 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Lapu2g00402 1143 SMART G9a_1 690 842 IPR003105 -
Lapu2g00402 1143 SUPERFAMILY PUA domain-like 677 851 IPR015947 -
Lapu2g00402 1143 MobiDBLite consensus disorder prediction 249 264 - -
Lapu2g00402 1143 Gene3D - 677 858 IPR036987 -
Lapu2g00402 1143 Pfam SET domain 981 1113 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00402 Lapu-Chr2 3292136 3297789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00402 635 1140 Su(var)3-9 homologs AT5G04940 40.952 3.49e-118 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu2g00402 SAD_SRA 2.1e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00402 K11420 - gmx:100803378 1562.36