Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00392 ATGTGCCGGCAGAATTCTCTGGTGCACCATTCCGGTGAAGAAGAAATTGCGGCTGATGAGACCCTTTTGGTTTATTGCAAGCCTGTTGAGCTGTACAATATTCTCTACCGTCGCGGTCTTCAAAATCCTTCCTTTCTTAGCAGATGTTTGCGTTATAAAATTACAGCAAGGCAGAAAAGGAGGTCGAGAGCAGGAATCGTGATTTTCAATTATAGGGACCGCTATAATATGCTTCGAAAAACAGAAGTGACTGAAGACTTTTCTTGCCCGTTTTGCTTGATGCAGTGTGGAAGCTTTAAGGGTTTACGATTGCATCTATGTTCATCACATGATCTATTCAACTTTGAGTTTTGGGTTACTGAAGATTACCAAGCAGTGAATGTCTCAGTAAAAATTGATATATTGAGATCAGAGAATGTTGCTGATGGAATAATTCCACAATCGCAAACCTTCTTCTTCTGTTCAAGGCCTCGAAAACGTAGAAGAAAGGACTCTGTTCAAAATGAAAAGCGCAGCAATGTAAAATTCATGGAGTTGGATTCACCAGAAGACATACAGAATGGATTTATGCGAAAAGATGACGTTGTAGATATCCTATGCTGCAAAGGAGAGAACGTGTCTAGAGCATCTCACAATGACAAGGTACTGCCCAGTGGAAGAATTGATGGTGGGAAATTTGGTCCTGATCATCCTGCCACCATGGACGACCTGGAGCATGTTGAATCCAGTTTCAACATTTCAGGTGTTTCAATTGCCATGCCCCAATCTTCTGGAGATCCTGAATGTAGTAAATCAATATGTAAAAGTGATCCTGCTCTGCCTGCTAAATCAAAGAAACTAAGCATGGATCGAACAGACTCAAGAAACCGAATGCTTCTGCAGAAGAGACTGTTCTTTCACTCACACAGAGTCCAGCCTATGGCACCAGAACAAGTGGTGTCAGACCGTGATAGTGAAGATGAAGTTGATGACGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAGCTCATGCATCTCTGGAACTCCTTTATGAGGAAGCAAAGGGTGCTGGCGGATGGTCATGTTCCGTGGGCATGTGAGGCATTTTCCAAGCTTCATGGAAAAGAGCTGGTCACATCTCCAACTTTATTCTGGTGTTGGAGGTTATTCATGATTAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAGCATAATATTAGATAGTTACAGAAACGAGGGATTGGATAGCAAATAA 1287 0.4172 MCRQNSLVHHSGEEEIAADETLLVYCKPVELYNILYRRGLQNPSFLSRCLRYKITARQKRRSRAGIVIFNYRDRYNMLRKTEVTEDFSCPFCLMQCGSFKGLRLHLCSSHDLFNFEFWVTEDYQAVNVSVKIDILRSENVADGIIPQSQTFFFCSRPRKRRRKDSVQNEKRSNVKFMELDSPEDIQNGFMRKDDVVDILCCKGENVSRASHNDKVLPSGRIDGGKFGPDHPATMDDLEHVESSFNISGVSIAMPQSSGDPECSKSICKSDPALPAKSKKLSMDRTDSRNRMLLQKRLFFHSHRVQPMAPEQVVSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKELVTSPTLFWCWRLFMIKLWNHGLLDACTMNNCSIILDSYRNEGLDSK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00392 428 CDD VEFS-box_EMF2-like 293 420 - -
Lapu2g00392 428 CDD ZnB-Zn_EMF2-like 13 134 - -
Lapu2g00392 428 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Lapu2g00392 428 Pfam VEFS-Box of polycomb protein 280 415 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00392 Lapu-Chr2 3215069 3224861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00392 1 68 C2H2 Transcription Factor Family AT5G51230 55.882 3.42e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00392 - - gmx:100807112 770.385