Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00388 ATGGCTTCCTTCATCCTCCTTATACCTACACTTATCTGTCTTCAATTTCATCTTCTTTCATTAGCTTTTGCAAACATTAATATTGGTTCCAAAATTTCCACTGATGACAATGGTGTGTGGCGTTCACCTTCGGGTCATTTTGCCTTTGGGTTTCGCCCATTGAATAATGGCACGGATCCCAGTATGAAGCTGTTCATGGTTGCCATATGGTACGACATGATACCCGACAGGACCGTTGTTTGGAGTGCAAAAACAGACAACAAACTTGCAACTGCACCAACCGGATCACAGGTTCGGATCTCGTCGGCGGGGCTAACACTTGAAGGTCCCAAAGGAGATTCCTTATGGACGTCAAACTGGGGAGGTATTGTCTCCGTAGGATCTATGCTTGACACTGGCAACTTTGTTCTACTCGATGGGAACTCTGAACAGGTGTGGCAAAGTTTTGAGAACCCCACAGACACGTTGTTGCCAAACCAATCTCTCCAACTCGGAGACACCCTAACTTCTCGATTGACTGACACCAATTACACTAGTGGAAGGTTCCAACTTTATTTCAAGGATGGTAATCTGTTGCTGAGTCCTTTTGCTTGGCCTTCTCCACTGCTTTACGACTCTTACTATGTGTTGGATGCCTCTGGTGCTGCTTCAACATTAGTGTTCAATGAGTCGGGGGATATCTATGTAAAGACCGCAAATGGGACTATAATCCAACCTCGTGGTTCAAAATGGAATAGCTTGGATCTCGACCCTGAGGAGAATTACTACAGAGCAACGCTTGACTTCAGTGGAGTTCTCACGCAGTATTCTCATCCACGGAACAACACTGCTCAGCCAGGGTGGAGCATCACGAGGTATGTTCCAGACAACATTTGCAGTGCAATATCTTATCAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAATCAGAGGCCTACCTGCAAATGCCCTTATGGGTATTCGCTGGTGGATCCAAGTAATCAATTTGGTGGATGCCAACCCAATTTCACCCTCGCTTGTGGAGCCGATGTTCAAACACCGCCAGACGAACTATATGAAATGCATATATCTCGGGATTTTAATTTTCCTCAGGGAGATTATGAACGGATAGAACCTTACTCTCACCAGGACTGCCAGCAATTGTGCTTGCAGGATTGCATGTGTGCTATGGCCGTTTCAGGAGGCGACACCTGTTGGCTGAAGAGATTTCCCCTAGGTAACGGTAGACAAGAAGCAGTCAATGACCAACATTTTGTCTATATCAAAACCAGAGTTATCCGTGACTTTTATCCAGGTGCAAACGGGGAACTTACCCCTACTCCGGATTCAAAGAAAGAAGCTAAGCTGTTTCTTTTGGGACCACTAATTGGTTCTCTTGTCCTTAACAGTATTCTCCTTGCTACAGTTGCTTTGGTTACTCTCATGAAGCAGAAAGTGAAAAGGGTTGCCGCAACTACTACTAGTCCTTTGGAAACAAATTTGCATTCGTTTACTTATGAAACATTGGAAAAGGCCACATGGAATTTTAAGGAGGAAATAGGCAGAGGATCTTATGGCATTGTTTACAAAGGGCAACTAGAAGCAGGTTCTTGTTATGTGGTTGCCGTGAAGAGATTGGACAGATTGGCACAAGACCGAGAGAAAGAATTTAGAATTGAATTGAGTTCCATTGGTAAAACCTGCCACAAAAATCTGGTAAGACTGATTGGATTTTGTGACGAGGGAATCCAGAGAATATTGGTCTACGAGTTCATGAGAAATGGTACTCTTGCAGACATCCTGTTTGGAAAATTCAACCCTAGATGGAATGTAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTGCATGAAGAGTGTGAAACTCCCATTATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGAGAACTTGAATCCAAAGATATCTGACTTTGGGTTGGCCAAGTTGTTGTTGTCTGATCAAAGTAGAACGACTACTATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTGCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTAATGTTGTTGGAAATCATTTGCAGGAGAAGAAGTGTGTTAATGGAGTCAGGGGAAGAAGAGAAGGCATTGCTGACAGATTGGGCTTGTGATTGCTTTATGGAAGGGAGAATAGATCTTCTAGTGGAGAATGATGAAGAGGCCTTATCTGACCATGTCAGGCTACAAAAGTGGGTGAAAATAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGACCAACAATGGGGATGGTCGTGCAAATGCTAGAAGGCTTTGTTGAAGTCCCTAACCCACCATCTCCTGTTGTCATACGTTCCATGTCTTAA 2406 0.4385 MASFILLIPTLICLQFHLLSLAFANINIGSKISTDDNGVWRSPSGHFAFGFRPLNNGTDPSMKLFMVAIWYDMIPDRTVVWSAKTDNKLATAPTGSQVRISSAGLTLEGPKGDSLWTSNWGGIVSVGSMLDTGNFVLLDGNSEQVWQSFENPTDTLLPNQSLQLGDTLTSRLTDTNYTSGRFQLYFKDGNLLLSPFAWPSPLLYDSYYVLDASGAASTLVFNESGDIYVKTANGTIIQPRGSKWNSLDLDPEENYYRATLDFSGVLTQYSHPRNNTAQPGWSITRYVPDNICSAISYQYGSGSCGYNSYCSMENQRPTCKCPYGYSLVDPSNQFGGCQPNFTLACGADVQTPPDELYEMHISRDFNFPQGDYERIEPYSHQDCQQLCLQDCMCAMAVSGGDTCWLKRFPLGNGRQEAVNDQHFVYIKTRVIRDFYPGANGELTPTPDSKKEAKLFLLGPLIGSLVLNSILLATVALVTLMKQKVKRVAATTTSPLETNLHSFTYETLEKATWNFKEEIGRGSYGIVYKGQLEAGSCYVVAVKRLDRLAQDREKEFRIELSSIGKTCHKNLVRLIGFCDEGIQRILVYEFMRNGTLADILFGKFNPRWNVRVGFALGIARGLVYLHEECETPIIHCDIKPQNILIDENLNPKISDFGLAKLLLSDQSRTTTMIRGTRGYVAPEWFKNVAVTVKVDVYSFGVMLLEIICRRRSVLMESGEEEKALLTDWACDCFMEGRIDLLVENDEEALSDHVRLQKWVKIAIWCIHEQPEMRPTMGMVVQMLEGFVEVPNPPSPVVIRSMS* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00388 801 FunFam S-receptor-like serine/threonine-protein kinase 481 589 - -
Lapu2g00388 801 Pfam D-mannose binding lectin 78 165 IPR001480 -
Lapu2g00388 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 793 - -
Lapu2g00388 801 Gene3D Transferase(Phosphotransferase) domain 1 590 795 - -
Lapu2g00388 801 SMART blect_4 30 152 IPR001480 -
Lapu2g00388 801 SMART serkin_6 512 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00388 801 CDD STKc_IRAK 518 785 - -
Lapu2g00388 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 192 IPR036426 -
Lapu2g00388 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lapu2g00388 801 ProSiteProfiles Protein kinase domain profile. 512 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00388 801 Pfam Protein kinase domain 513 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu2g00388 801 Gene3D Phosphorylase Kinase; domain 1 474 589 - -
Lapu2g00388 801 PIRSF SRK 1 801 IPR024171 GO:0004674
Lapu2g00388 801 Gene3D - 24 150 IPR036426 -
Lapu2g00388 801 ProSitePatterns Protein kinases ATP-binding region signature. 518 542 IPR017441 GO:0005524
Lapu2g00388 801 ProSiteProfiles Bulb-type lectin domain profile. 23 150 IPR001480 -
Lapu2g00388 801 FunFam Serine/threonine-protein kinase 153 295 - -
Lapu2g00388 801 SUPERFAMILY Protein kinase-like (PK-like) 493 783 IPR011009 -
Lapu2g00388 801 Gene3D - 152 279 IPR036426 -
Lapu2g00388 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00388 Lapu-Chr2 3199876 3202285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00388 498 787 Receptor kinase-like Gene Family AT5G45780 40.878 3.16e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu2g00388 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00388 - - gmx:100789263 1154.81